MATLAB Toolboxes.doc

MATLAB Toolboxes top Audio - Astronomy - BioMedicalInformatics - Chemometrics - Chaos - Chemistry - Coding - Control - Communications - Engineering - Excel - FEM - Finance - GAs - Graphics - Images - ICA - Kernel - Markov - Medical - MIDI - Misc. - MPI - NNets - Oceanography - Optimization - Plot - Signal Processing - Optimization - Statistics - SVM - etc .New ZSM (zero sum multinomial)/zsmcode.html Binaural-modeling software for MATLAB/Windowshttp:/www.lifesci.sussex.ac.uk/home/Michael_Akeroyd/download2.html Statistical Parametric Mapping (SPM)http:/www.fil.ion.ucl.ac.uk/spm/ext/ BOOTSTRAP MATLAB TOOLBOX.au/downloads/bootstrap_toolbox.html The DSS package for MATLABDSS Matlab package contains algorithms for performing linear, deflation and symmetric DSS.http:/www.cis.hut.fi/projects/dss/package/ Psychtoolbox/download.html Multisurface Method Tree with MATLAB/olvi/uwmp/msmt.html A Matlab Toolbox for every single topic !/baum/toolboxes.html eg. BrainStorm - MEG and EEG data visualization and processingCLAWPACK is a software package designed to compute numerical solutions to hyperbolic partial differential equations using a wave propagation approach/claw/ DIPimage - Image Processing ToolboxPRTools - Pattern Recognition Toolbox (+ Neural Networks) NetLab - Neural Network ToolboxFSTB - Fuzzy Systems ToolboxFusetool - Image Fusion Toolboxhttp:/www.metapix.de/toolbox.htm WAVEKIT - Wavelet ToolboxGat - Genetic Algorithm Toolbox TSTOOL is a MATLAB software package for nonlinear time series analysis.TSTOOL can be used for computing: Time-delay reconstruction, Lyapunov exponents, Fractal dimensions, Mutual information, Surrogate data tests, Nearest neighbor statistics, Return times, Poincare sections, Nonlinear predictionhttp:/www.physik3.gwdg.de/tstool/ MATLAB / Data description toolbox A Matlab toolbox for data description, outlier and novelty detection March 26, 2004 - D.M.J. Tax http:/www-ict.ewi.tudelft.nl/davidt/dd_tools/dd_manual.html MBEhttp:/www.pmarneffei.hku.hk/mbetoolbox/ Betabolic network toolbox for Matlab http:/www.molgen.mpg.de/lieberme/pages/network_matlab.html Pharmacokinetics toolbox for Matlab http:/page.inf.fu-berlin.de/lieber/seiten/pbpk_toolbox.html The SpiderThe spider is intended to be a complete object orientated environment for machine learning in Matlab. Aside from easy use of base learning algorithms, algorithms can be plugged together and can be compared with, e.g model selection, statistical tests and visual plots. This gives all the power of objects (reusability, plug together, share code) but also all the power of Matlab for machine learning research.http:/www.kyb.tuebingen.mpg.de/bs/people/spider/index.html Schwarz-Christoffel Toolbox/matlabcentral/fileexchange/loadFile.do?objectId=1316&objectType=file# XML Toolbox /matlabcentral/fileexchange/loadFile.do?objectId=4278&objectType=file FIR/TDNN Toolbox for MATLAB Beta version of a toolbox for FIR (Finite Impulse Response) and TD (Time Delay) Neural Networks. /interval-comp/dagstuhl.03/oish.pdf Misc. http:/www.dcsc.tudelft.nl/Research/Software/index.html Astronomy Saturn and Titan trajectories . MALTAB astronomy/abrecht/Matlab-codes/ Audio MA Toolbox for Matlab Implementing Similarity Measures for Audiohttp:/www.oefai.at/elias/ma/index.html MAD - Matlab Auditory Demonstrationshttp:/www.dcs.shef.ac.uk/martin/MAD/docs/mad.htm Music Analysis - Toolbox for Matlab : Feature Extraction from Raw Audio Signals for Content-Based Music Retrievalhttp:/www.ai.univie.ac.at/elias/ma/ WarpTB - Matlab Toolbox for Warped DSPBy Aki Hrm and Matti Karjalainenhttp:/www.acoustics.hut.fi/software/warp/ MATLAB-related Softwarehttp:/www.dpmi.tu-graz.ac.at/schloegl/matlab/Biomedical Signal data formats (EEG machine specific file formats with Matlab import routines)http:/www.dpmi.tu-graz.ac.at/schloegl/matlab/eeg/MPEG Encoding library for MATLAB Movies (Created by David Foti)It enables MATLAB users to read (MPGREAD) or write (MPGWRITE) MPEG movies. That should help Video Quality project.Filter Design packagehttp:/www.ee.ryerson.ca:8080/mzeytin/dfp/index.html Octave by Christophe COUVREUR (Generates normalized A-weigthing, C-weighting, octave and one-third-octave digital filters)/matlabcentral/fileexchange/loadFile.do?objectType=file&objectId=69 Source Coding MATLAB Toolbox/users/kieffer/programs.html Bio Medical Informatics (Top) CGH-Plotter: MATLAB Toolbox for CGH-data AnalysisCode: http:/sigwww.cs.tut.fi/TICSP/CGH-Plotter/ Poster: http:/sigwww.cs.tut.fi/TICSP/CSB2003/Posteri_CGH_Plotter.pdf The Brain Imaging Software Toolboxhttp:/www.bic.mni.mcgill.ca/software/ MRI Brain Segmentation/matlabcentral/fileexchange/loadFile.do?objectId=4879 Chemometrics (providing PCA) (Top) Matlab Molecular Biology & Evolution Toolbox(Toolbox Enables Evolutionary Biologists to Analyze and View DNA and Protein Sequences)James J. Cai http:/www.pmarneffei.hku.hk/mbetoolbox/ Toolbox provided by Prof. Massart research grouphttp:/minf.vub.ac.be/fabi/publiek/Useful collection of routines from Prof age smilde research grouphttp:/www-its.chem.uva.nl/research/pacMultivariate Toolbox written by Rune Mathisen/mvartools/index.htmlMatlab code and datasetshttp:/www.acc.umu.se/tnkjtg/chemometrics/dataset.html Chaos (Top) Chaotic Systems Toolbox /matlabcentral/fileexchange/loadFile.do?objectId=1597&objectType=file# HOSA Toolboxhttp:/www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=3013&objectType=file Chemistry (Top) MetMAP - (Metabolical Modeling, Analysis and oPtimization alias Met. M. A. P.)http:/webpages.ull.es/users/sympbst/pag_ing/pag_metmap/index.htm DoseLab - A set of software programs for quantitative comparison of measured and computed radiation dose distributions GenBank Overview/Genbank/GenbankOverview.html Matlab: /matlabcentral/fileexchange/loadFile.do?objectId=1139 Coding Code for the estimation of Scaling Exponentshttp:/www.cubinlab.ee.mu.oz.au/darryl/secondorder_code.html Control (Top) Control Tutorial for Matlab /group/ctm/ Another Communications (Top) Channel Learning Architecture toolbox(This Matlab toolbox is a supplement to the article HiperLearn: A High Performance Learning Architecture)http:/www.isy.liu.se/cvl/Projects/hiperlearn/ Source Coding MATLAB Toolbox/users/kieffer/programs.html TCP/UDP/IP Toolbox 2.0.4/matlabcentral/fileexchange/loadFile.do?objectId=345&objectType=file Home Networking Basis: Transmission Environments and Wired/Wireless ProtocolsWalter Y. Chen/support/books/book5295.jsp?category=new&language=-1 MATLAB M-files and Simulink models /matlabcentral/fileexchange/loadFile.do?objectId=3834&objectType=fileEngineering (Top) OPNML/MATLAB Facilities/OPNML_Matlab/ Mesh Generation/home/vavasis/qmg-home.html OpenFEM : An Open-Source Finite Element Toolbox /CALFEM is an interactive computer program for teaching the finite element method (FEM)http:/www.byggmek.lth.se/Calfem/frinfo.htm The Engineering Vibration Toolbox/people/faculty/jslater/vtoolbox/vtoolbox.html SaGA - Spatial and Geometric Analysis Toolboxby Kirill K. Pankratov/glenn/kirill/saga.html MexCDF and NetCDF Toolbox For Matlab-5&6/staffpages/cdenham/public_html/MexCDF/nc4ml5.htmlCUEDSID: Cambridge University System Identification Toolboxhttp:/www-control.eng.cam.ac.uk/jmm/cuedsid/Kriging Toolbox/software/Geostats_software/MATLAB_KRIGING_TOOLBOX.htm Monte Carlo (Dr Nando)http:/www.cs.ubc.ca/nando/software.html RIOTS - The Most Powerful Optimal Control Problem Solver/adam/RIOTS/ Excel MATLAB xlsheets/matlabcentral/fileexchange/loadFile.do?objectId=4474&objectType=file write2excel /matlabcentral/fileexchange/loadFile.do?objectId=4414&objectType=file Finite Element Modeling (FEM) (Top) OpenFEM - An Open-Source Finite Element Toolbox / NLFET - nonlinear finite element toolbox for MATLAB ( framework for setting up, solving, and interpreting results for nonlinear static and dynamic finite element analysis.)/ GetFEM - C+ library for finite element methods elementary computations with a Matlab interface http:/www.gmm.insa-tlse.fr/getfem/ FELIPE - FEA package to view results ( contains neat interface to MATLAhttp:/www.brunel.ac.uk/blstmbr/felipe/Finance (Top) A NEW MATLAB-BASED TOOLBOX FOR COMPUTER AIDED DYNAMIC TECHNICAL TRADINGStephanos Papadamou and George StephanidesDepartment of Applied Informatics, University Of Macedonia Economic & Social Sciences, Thessaloniki, Greece/fen31/one_time_articles/dynamic_tech_trade_matlab6.htm Paper: :8089/eps/prog/papers/0201/0201001.pdf CompEcon Toolbox for Matlab/pfackler/compecon/toolbox.html Genetic Algorithms (Top) The Genetic Algorithm Optimization Toolbox (GAOT) for Matlab 5 /mirage/GAToolBox/gaot/ Genetic Algorithm ToolboxWritten & distributed by Andy Chipperfield (Sheffield University, UK)http:/www.shef.ac.uk/uni/projects/gaipp/gatbx.html Manual: http:/www.shef.ac.uk/gaipp/ga-toolbox/manual.pdf Genetic and Evolutionary Algorithm Toolbox (GEATbx) Evolutionary Algorithms for MATLAB/links/ea_matlab.html Genetic/Evolutionary Algorithms for MATLABhttp:/www.systemtechnik.tu-ilmenau.de/pohlheim/EA_Matlab/ea_matlab.html Graphics VideoToolbox (C routines for visual psychophysics on Macs by Denis Pelli)/VideoToolbox/ Paper: /pelli/pubs/pelli1997videotoolbox.pdf 4D toolbox /daniel/links/matlab/4DToolbox.html Images (Top) Eyelink Toolbox/eyelinktoolbox/ Paper: /eyelinktoolbox/EyelinkToolbox.pdf CellStats: Automated statistical analysis of color-stained cell images in Matlabhttp:/sigwww.cs.tut.fi/TICSP/CellStats/ SDC Morphology Toolbox for MATLAB (powerful collection of latest state-of-the-art gray-scale morphological tools that can be applied to image segmentation, non-linear filtering, pattern recognition and image analysis)/ Image Acquisition Toolbox/products/imaq/ Halftoning Toolbox for MATLAB/bevans/projects/halftoning/toolbox/index.html DIPimage - A Scientific Image Processing Toolbox for MATLABhttp:/www.ph.tn.tudelft.nl/DIPlib/dipimage_1.html PNM Toolboxhttp:/home.online.no/pjacklam/matlab/software/pnm/index.html Another ICA / KICA and KPCA (Top) ICATU Toolboxhttp:/mole.imm.dtu.dk/toolbox/menu.html MISEP Linear and Nonlinear ICA Toolboxhttp:/neural.inesc-id.pt/lba/ica/mitoolbox.html Kernel Independant Component Analysis/fbach/kernel-ica/index.htm Matlab: kernel-ica version 1.2 KPCA- Please check the software section of kernel machines.Kernel Statistical Pattern Recognition Toolbox http:/cmp.felk.cvut.cz/xfrancv/stprtool/ MATLABArsenal A MATLAB Wrapper for Classification /tmp/MATLABArsenal.htm Markov (Top) MapHMMBOX 1.1 - Matlab toolbox for Hidden Markov Modelling using Max. Aposteriori EM Prerequisites: Matlab 5.0, Netlab. Last Updated: 18 March 2002.http:/www.robots.ox.ac.uk/parg/software/maphmmbox_1_1.tar HMMBOX 4.1 - Matlab toolbox for Hidden Markov Modelling using Variational BayesPrerequisites: Matlab 5.0,Netlab. Last Updated: 15 February 2002.http:/www.robots.ox.ac.uk/parg/software/hmmbox_3_2.tar http:/www.robots.ox.ac.uk/parg/software/hmmbox_4_1.tar Markov Decision Process (MDP) Toolbox for MatlabKevin Murphy, 1999/murphyk/Software/MDP/MDP.zipMarkov Decision Process (MDP) Toolbox v1.0 for MATLABhttp:/www.inra.fr/bia/T/MDPtoolbox/ Hidden Markov Model (HMM) Toolbox for Matlab/murphyk/Software/HMM/hmm.html Bayes Net Toolbox for Matlab /murphyk/Software/BNT/bnt.html Medical (Top) EEGLAB Open Source Matlab Toolbox for Physiological Research (formerly ICA/EEG Matlab toolbox)/scott/ica.html MATLAB Biomedical Signal Processing Toolbox/Toolbox/ Powerful package for neurophysiological data analysis ( Igor Kagan webpage)/Matlab/Unitret.html EEG / MRI Matlab Toolbox/ Microarray data analysis toolbox (MDAT): for normalization, adjustment and analysis of gene expression data.Knowlton N, Dozmorov IM, Centola M. Department of Arthritis and Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA 73104. We introduce a novel Matlab toolbox for microarray data analysis. This toolbox uses normalization based upon a normally distributed background and differential gene expression based on 5 statistical measures. The objects in this toolbox are open source and can be implemented to suit your application. AVAILABILITY: MDAT v1.0 is a Matlab toolbox and requires Matlab to run. MDAT is freely available at:/publications/2004/knowlton/MDAT.zipMIDI (Top) MIDI Toolbox version 1.0 (GNU General Public License)http:/www.jyu.fi/musica/miditoolbox/ Misc. (Top) MATLAB-The Graphing Tool/abrecht/matlab.html 3-D Circuits The Circuit Animation Toolbox for MATLAB/other/3Dcircuits/SendMailhttp:/carol.wins.uva.nl/portegie/matlab/sendmail/ Coolplothttp:/www.reimeika.ca/marco/matlab/coolplots.html MPI (Matlab Parallel Interface) Cornell Multitask Toolbox for MATLAB/Services/Software/CMTM/ Beolab Toolbox for v6.5Thomas Abrahamsson (Professor, Chalmers University of Technology, Applied Mechanics, Gteborg, Sweden)http:/www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=1216&objectType=file PARMATLABNeural Networks (Top) SOM Toolbox http:/www.cis.hut.fi/projects/somtoolbox/ Bayes Net Toolbox for Matlab/murphyk/Software/BNT/bnt.htmlNetLabhttp:/www.ncrg.aston.ac.uk/netlab/ Random Neural Networks/ahossam/rnnsimv2/ ftp: /pub/contrib/v5/nnet/rnnsimv2/ NNSYSID Toolbox (tools for neural network based identification of nonlinear dynamic systems)http:/www.iau.dtu.dk/research/control/nnsysid.html Oceanography (Top) WAFO. Wave Analysis for Fatigue and Oceanographyhttp:/www.maths.lth.se/matstat/wafo/ ADCP toolbox for MATLAB (USGS, USA)Presented at the Hydroacoustics Workshop in Tampa and at ADCPs in Action in San Diego/operations/stg/pubs/ADCPtools SEA-MAT - Matlab Tools for Oceanographic AnalysisA collaborative effort to organize and distribute Matlab tools for the Oceanographic Community/ Ocean Toolboxhttp:/www.mar.dfo-mpo.gc.ca/science/ocean/epsonde/programming.htmlEUGENE D. GALLAGHER(Associate Professor, Environmental, Coastal & Ocean Sciences)/edgwebp.htmOptimization (Top) MODCONS - a MATLAB Toolbox for Multi-Objective Control System Design http:/www.eee.kcl.ac.uk/mecheng/jfw/modcons.html Lazy Learning Packagehttp:/iridia.ulb.ac.be/lazy/ SDPT3 version 3.02 - a MATLAB software for semidefinite-quadratic-linear programming.sg/mattohkc/sdpt3.html Minimum Enclosing Balls: Matlab Code /meb/ SOSTOOLS Sum of Squares Optimization Toolbox for MATLAB Users guide/sostools/sostools.pdf PSOt - a Particle Swarm Optimization Toolbox for use with MatlabBy Brian Birge . A Particle Swarm Optimization Toolbox (PSOt) for use with the Matlab scientific programming environment has been developed. PSO isintroduced briefly and then the use of the toolbox is explained with some examples. A link to downloadable code is provided.Plot/software/plotting/gbplot/ Signal Processing (Top)Filter Design with Motorola DSP56Khttp:/www.ee.ryerson.ca:8080/mzeytin/dfp/index.html Change Detection and Adaptive Filtering Toolboxhttp:/www.sigmoid.se/ Signal Processing Toolbox/products/signal/ ICATU Toolbox