生物信息学 相关数据库资源介绍

生物信息学

相关数据库资源介绍

Reference：2021/5/91

生物信息学相关数据库资源

核酸及其相关数据库（核酸序列、基因组相关数据库、核酸三维结构、其他）蛋白质相关数据库（蛋白质序列、蛋白质三维结构、蛋白质组（二维凝胶电泳数据库）、信号传导及蛋白质-蛋白质相互作用相关数据库、DNA和蛋白质相互作用数据库）基因或蛋白质一些特定数据库糖类及其相关数据库蛋白质翻译后修饰相关数据库基因表达数据库人类基因突变及疾病相关数据库进化相关数据库及资源专利数据库资源目录服务器或网页2021/5/92一、核酸及其相关数据库

1、核酸序列数据库

EMBL-EMBLNucleotidesequencedatabase(EBI)*GenBank-GenBankNucleotideSequencedatabase(NCBI)*DDBJ-DNADataBankofJapan*BIOSINO我国的核酸序列公共数据库dbEST-DatabaseofExpressedSequenceTags

(NCBI)dbSTS-DatabaseofSequenceTaggedSites(NCBI)2021/5/932.基因组及相关数据库

GenomicDatabasesGenomeWeb(HGMP)-AcatalogueofusefulWebsitesforGenomicswithasetofcollectionsofgenomedatabases

GSDB-GenomeSequencedatabase(NCGR)GOLD-GenomesOn-linedb一些数据库的直接链接2021/5/943.核酸三维结构数据库NDB-NucleicAcidDatabank(3Dstructures)BNASDB-NucleicacidstructuredbfromUniversityofPune2021/5/954.其他AsDb-AberrantSplicingdbACUTS-AncientconserveduntranslatedDNAsequencesdbCodonUsageDb

-ThefrequencyofcodonuseineachorganismismadesearchablethroughthisWorldWideWebsite.EPD-EukaryoticPromoterdbHOVERGEN-HomologousVertebrateGenesdbIMGT-ImMunoGeneTicsdb[MirroratEBI]ISIS-IntronSequenceandInformationSystemRDP-RibosomaldbProjectgRNAsdb-GuideRNAdbPLACE-Plantcis-actingregulatoryDNAelementsdb2021/5/96其它PlantCARE-Plantcis-actingregulatoryDNAelementsdbsRNAdb-SmallRNAdbssurRNA-SmallribosomalsubunitdblsurRNA-Largeribosomalsubunitdb5SrRNA-5SribosomalRNAdbtmRNAWebsitetmRDB-tmRNAdBtRNA-tRNAcompilationfromtheUniversityofBayreuthuRNADB-uRNAdb2021/5/97其他RNAediting-RNAeditingsiteRNAmoddb-RNAmodificationdbTelDB-MultimediaTelomereResourceTRADAT-TRAnscriptionDatabasesandAnalysisToolsSubviralRNAdb-SmallcircularRNAsdb(viroidandviroid-like)2021/5/98TransgenicsCreTransgenicDatabase-CretransgenicmouselinesTransgenic/TargetedMutationDatabase-Informationontransgenicanimalsandtargetedmutations2021/5/99二.蛋白质序列和相关数据库SWISS-PROT-SWISS-PROTannotatedproteinsequencedbPIR-international-TheProteinInformationResource(proteinsequence)MIPS-Martinsriedinstituteforproteinsequenceandhomologydataandyeastgenomeinformation2021/5/910蛋白质及其相关数据库

PROSITE-PROSITEdictionaryofproteinsitesandpatternsInterPro-IntegratedResourcesofProteinsDomainsandFunctionalSitesBLOCKS-BLOCKSdbDOMO-Proteindomaindb(Automaticallygenerated)Pfam-Proteinfamiliesdb(HMMderived)[MirroratSanger]PRINTS-ProteinMotiffingerprintdbProDom-Proteindomaindb(Automaticallygenerated)PROTOMAP-AnautomatichierarchicalclassificationofSWISS-PROTproteinsSBASE-SBASEdomaindb(Proteindomainsequencelibrary)SMART-Proteinsignallingandextracellulardomainpatterns(SimpleModularArchitectureResearchTool)ProClass-Proteinsequencealignmentsandcurationofproteinfamilies2021/5/911.蛋白质三维结构和相关数据库PDB-ProteinDataBank[MirrorsinEBI]BioMagResBank-Repositoryfordataonproteins,peptides,andnucleicacidsfromNMRspectroscopySWISS-MODELRepository-AutomaticallygeneratedproteinmodelsdbModBase-DbofcomparativeproteinstructuremodelsCATH-UCLBSMstructuralclassificationofproteinsSCOP-Structuralclassificationofproteins[MirroratUSA|Israel|Singapore|Australia]Mol_R_Us-MoleculesRUs,browserforPDBBMMDomainServer-BiomolecularModellingLaboratory(ICRF)proteindomainserverPRESAGE-Collaborativeresourceforstructuralgenomics2021/5/912蛋白质三维结构和相关数据库SBASE-SBASEdomaindb(Proteindomainsequencelibrary)SMART-Proteinsignallingandextracellulardomainpatterns(SimpleModularArchitectureResearchTool)ProClass-ProteinsequencealignmentsandcurationofproteinfamiliesKabat-KabatdbofproteinofimmunologicalinterestPMD-ProteinMutantdb2021/5/913蛋白质二维凝胶电泳数据库WORLD-2DAcompleteindexof2DdbandserversPhoretixlinks-Phoretixpageoflinksto2Dgeldb2021/5/914三、信号传导及蛋白质-蛋白质相互作用相关数据库DIP-DbofInteractingProteinsINTERACT-Protein-ProteininteractiondbProNet-Protein-Proteininteractiondb

CANSITE-SignalTransduction'sWebSPAD-SignalingpathwaydbCSNDB-CellSignalingNetworksdb2021/5/915四、DNA和蛋白质相互作用数据库DPInteract-DNA-Proteinsinteractionsdb2021/5/916五、特定基因或蛋白质的数据库AAA-AAAfamilyofATPasesserverAcetylcholinesterasesALDH-AldehydedehydrogenasegenesuperfamilydbAminoacyl-tRNAsynthetasesinSWISS-PROT-Listofaminoacyl-tRNAsynthetasesinSWISS-PROTAARSDB-Aminoacyl-tRNAsynthetasesdbAllergensinSWISS-PROT-NomenclatureandindexofallergensinSWISS-PROT2021/5/917特定基因或蛋白质的数据库AMSDb-AntimicrobialsequencesdbAntibodyresourceLinkstoantibodyrelatedWebresourcesAustralianvenomandtoxindbBacillusthuringiensistoxinspecificitydbTFII-BasaltranscriptionfactorsBloodgroupantigensinSWISS-PROTBCGD-BreastcancergenesdbfromMBCRBRENDA-Dbofenzymefunctionaldata2021/5/918特定基因或蛋白质的数据库EF-handCaBP-EF-handcalcium-bindingproteinsdbCAZy-Carbohydrate-ActiveenZYmesWebsiteCBSdomain-CystathionineBetaSynthasedomainWWWpageCDantigensinSWISS-PROT-Nomenclatureforsurfaceproteinsofhumanleucocytes(CD)2021/5/919特定基因或蛋白质的数据库CDantigensinPROW-DatabaseoninformationaboutCDantigensChaperonin-InformationonGroELandGroESchaperoninsConotoxins-InformationonconotoxinsfromaWebsiteonconeshells。。etc。。2021/5/920糖类相关数据库CarbBank-ComplexCarbohydrateStructureDatabaseGlycoSuiteDB-DbofglycanstructuresTGN-TheGlycoscienceNetworkFCCA-ForumCarbohydratesComingofAgeCARBHYD-CarbohydrateinformationWWWsitesMonosacharidebrowser-SpacefillingFischerprojectionformonosaccharides

2021/5/921蛋白质翻译后修饰相关数据库

O-GlycBase-O-glycosylatedproteinsdbPhosphoBase-PhosphorylationsitesdbRESID-DbofAminoAcidModifications2021/5/922

基因表达数据库

ASDB-Proteinproductsandexpressionpatternsofalternatively-splicedgenesAxeldb-GeneexpressioninXenopusBodyMap-HumanandmousegeneexpressiondataEpoDB-GenesexpressedinvertebrateRBCFlyView-DrosophiladevelopmentandgeneticsGeneExpressionDatabase(GXD)-MousegeneexpressionandgenomicsKidneyDevelopmentDatabase-Kidneydevelopmentandgeneexpression2021/5/923基因表达数据库

MAGEST-Ascidian(Halocynthiaroretzi)geneexpressionpatternsMouseAtlasandGeneExpressionDatabase-Spatially-mappedgeneexpressiondataPEDB-NormalandaberrantprostategeneexpressionToothDevelopmentDatabase-GeneexpressionindentaltissueTRIPLES-TRansposon-InsertionPhenotypes,LocalizationandExpressioninSaccharomyces2021/5/924人类基因突变及疾病相关数据库

HMGD-HumanGeneMutationdbSVD-SequencevariationdbHGBASE-HumanGenicBi-AllelicSequencesdbTheSNPconsortiumdbSNP-Humansinglenucleotidepolymorphism(SNP)dbListofmutationdatabasesfromOMIMListofmutationdatabasesfromIMT(Finland)2021/5/925人类基因突变及疾病相关数据库

ADB-Albinismdb(Mutationsinhumangenescausingalbinism)Alpha-glucosidase-Informationabouthumanacidalpha-glucosidase(GSD-II)ARmutations-HumanandrogenreceptormutationdbAntithrombinmutationdbAsthmaandAllergygenedbBIOMDB-DbofmutationscausingtetrahydrobiopterindeficienciesBLMbase-HumanBLMmutationdb(Bloomsnydrom)2021/5/926人类基因突变及疾病相关数据库BTKbase-HumanBTKmutationdb(X-linkedagammaglobulinemia)CD40Lbase-HumanCD40ligandmutationdbCOL1/3mutation-HumanTypeIandIIIcollagenmutationdbCFTRmutation-Humancysticfibrosismutationdb(CFTR)EMDdb-HumanEmerin(EMD)mutationdb(Emery-Dreifussmusculardystrophy)KMeyeDB-Eyediseasegenesdb2021/5/927人类基因突变及疾病相关数据库FVIImutation-HumanFactorVIImutationdbHAMSTeRS-HumanFactorVIIImutationdb(HaemophiliaA)HAeMB-HumanFactorIXmutationdb(HaemophiliaB)FBN1mutation-Humanfibrillin1mutationdb(Marfansyndrome)G6PD-HumanG6PDdeficiencyresourceGaltmutation-Humangalactose-1-phosphateuridylyltransferasemutationdb(Galactosemia)2021/5/928人类基因突变及疾病相关数据库HEXAdb-HumanHexosaminidaseAmutationdb(Tay-sachsdisease)IL2RGbase-HumanIL2RG(Interleukin-2receptorgamma)mutationdb(X-SCID)L1CAMmutation-HumanL1CAMmutationdbLDLRmutation-HumanLDLRmutationdb(Familialhypercholesterolemia)LQTSdb-LongQTsyndromedbNCF1base-HumanNCF1mutationdbNCF2base-HumanNCF2mutationdb2021/5/929人类基因突变及疾病相关数据库NeuromusculardiseaseswebsiteNCL-NeuronalCeroidLipofuscinosesmutationdbOTCase-Humanornithinetranscarbamylase(OTCase)websiteCytochromeP450allelesnomenclaturep53mutationdb-UniversityofTokyop53mutationdbGermlinep53mutationdb-UniversityofPraguedbofgermlinep53mutationsPAHdb-Humanphenylalaninehydroxylase(PAH)mutationdb2021/5/930人类基因突变及疾病相关数据库PAX6mutation-HumanPAX6mutationdbPrion-PrionandpriondiseasewebsiteRAG1base-HumanRAG1mutationdbRAG2base-HumanRAG2mutationdbRB1base-Humanretinoblastoma-associatedprotein(RB)mutationdbRetNet-RetinalInformationNetworkRetinaInternationalScientificNewsletter-InformationonRetinalgenes,proteinsanddiseases2021/5/931人类基因突变及疾病相关数据库TSC-TSC(TSC1/TSC2)variationdbTSC2-Cardiff-RotterdamTuberousSclerosis(TS)db(Tuberin;TSC2)TGDB-TumorgenedbVMD2mutation-HumanVMD2mutationdbvWFmutation-HumanvonWillebrandfactor(vWF)mutationdbWRN-HumanWRNmutationdb(Warnerdisease)WT1mutation-HumanWT1mutationdbX-ALDmutation-HumanABCD1mutationdb

2021/5/932进化相关数据库及资源

ClustersofOrthologousGroups(COG)-Phylogeneticclassificationofproteinsfrom21completegenomesXREFdb-Cross-referencingofmodelorganismgeneticswithmammalianphenotypes

TreeBASE-RelationaldbofphylogeneticinformationTheTreeoflife-CollectionofWWWpagesonphylogenyandbiodiversityoforganisms2021/5/933

专利数据库

DPD-DNAPatentdbAgPatents-AgriculturalBiotechnologypatentsfromtheUSDAUSPTOpatentdb-USAPatentandTrademarkOfficepatentdbEsp@cenet-PatentinformationdatabasefromtheEuropeanPatentOffice(worldwidecoverage)TheDelphionIntellectualPropertyNetwork(IPN)

forsearching,viewing,andanalyzingpatentdocuments.2021/5/934

资源目录服务器或网页

BioCatalog-TheBioCatalogatEBIYellowBAGI-BioAccessGuidetotheInternetatHoustonUniversitySoftwarelibraryfromGDBCAT-DatabasescatalogatINFOBIOGENMBDL-MolecularBiologyDatabaseList

Amos'WWWlinkspage

NucleicAcidsResearchdatabaseissue2021/5/935HumanCEPH-genotypedatabaseCEPHhomearesearchlaboratorywhichconstructsmapsofthehumangenomeGeneMap'99-AGeneMapoftheHumanGenome(NCBI)OMIM-OnlineMendelianInheritanceinManGENATLAS-HumangenesatlasGeneClinics-MedicalgeneticsknowledgebaseGDB-HumangenesandgenomicmapsGeneCards-Dbintegratinginformationonhumangenes2021/5/936HumanUDB-UnifieddbforHumangenomemappingEnsembl-HumangenomeannotationssiteUCSChumangenomeworkingdraftTIGRHGI-TIGRHumanGeneIndexHumanBACEndsDatabase-Non-redundanthumanBACendsequencesHsUniGene-HumantranscriptsinGenBank(ESTclusters)STACK-SequenceTagAlignmentandConsensusKnowledgebase(DbofconsensushumanESTs)2021/5/937HumanA-Humanpredictedgeneindex/catalogGenLink-HumangeneticsresourceGENOTK-HumancDNAdbHUGE-HumanUnidentifiedGene-EncodedlargeproteinscDNA(KIAA...)CGAP-CancerGenomeAnatomyProjectSCDb-Stemcelldb2021/5/938HumanHuGeMap-HumangenomegeneticandphysicalmapdataG3-RH-StanfordG3andTNGradiationhybridmapsGB4-RH-Genebridge4(GB4)humanradiationhybridmapsRadiationHybridDatabase-Radiationhybridmapdata2021/5/939

Humanchromosome1~8Chr1-Humanchromosome1atRockefellerUniversity[MirroratEBI]Chr3-Humanchromosome3dbattheUniversityofTexasHealthScienceCenterChr7-Humanchromosome7dbatOntario'sHospitalforSickChildrenChr8SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome82021/5/940Humanchromosome9~11Chr9SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome9Chr9-Humanchromosome9dbChr10SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome10GTCChr10data-Humanchromosome10datafromGenomeTherapeuticsCorporationChr11SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome1111DB-Humanchromosome11dbatImperialCollege(U.K.)2021/5/941Humanchromosome12~16Chr12SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome12Chr13-Humanchromosome13dbatColumbiaChr14SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome14Chr15SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome15Chr15UBC-Humanchromosome15WWWpageatUBCChr16SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome162021/5/942Humanchromosome16~19

Chr16LANL-Humanchromosome16dbatLosAlamosNationalLaboratoryChr16TIGR-Humanchromosome16dbatTIGRChr17SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome17Chr18SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome18Chr18-Humanchromosome18atBostonChildren'sHospitalChr19SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome192021/5/943Humanchromosome20~22Chr20SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome20Chr21SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome21Chr21atRIKEN-Humanchromosome21genomesiteatRIKEN(Japan)Chr21atERI-Humanchromosome21genomicsequencedbfromtheEleanorRooseveltInstituteChr22SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome22Chr22atSanger-SangerCenterchromosome22projectChr22atHGC-Humangenomecenterforchromosome222021/5/944HumanchromosomeX~YChrXSWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosomeXIXDB-IntegratedXchromosomedbChrYSWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosomeY

DRESH-HumancDNAcloneshomologoustoDrosophilamutantgenes2021/5/945VertebratesOMIA-OnlineMendelianInheritanceinAnimalsMGI-MouseGenomeInformatics(includesMouseGenomeDatabase(MGD))[MirrorsinAustralia|UK|Japan]TIGRMGI-TIGRMouseGeneIndexMmUniGene-MousetranscriptsinGenBank(ESTclusters)RatMAP-RatgenomedbTIGRRGI-TIGRRatGeneIndexRnUnigene-RattranscriptsinGenBank(ESTclusters)2021/5/946Vertebrates

BovBASE-Bovinegenomedb(inUK)BOVMAP-Bovinegenomedb(inFrance)Ark-Cat-CatgenomedbHorseBASE-HorsegenomedbDGP-DogGenomeProjectPiGBASE-PiggenomedbSheepBASE-Sheepgenomedb(alsoknownasSheepMap)[MirrorinUK]MIS-MendelianInheritanceinSheep

ChickGBASE-Chickengenomedb

2021/5/947VertebratesFugu-HGMPResourceCentreFuguProject(Fugurubripes)Medakafish-Mekadafish(Oryziaslatipes)serverArk-Tilapia-TilapiamossambicagenomedbThefishnet-ZebrafishserverFishBase-Globalinformationsystemonfishes2021/5/948Mitochondrionandchloroplast

GOBASE-OrganelleGenomeDatabaseMitoDat-MendelianInheritanceandtheMitochondriondb(mitochondrialnucleargenes)MITOMAP-HumanmitochondrialgenomedbMmtDB-MetazoamitochondrialDNAvariantsdbMitBASE-IntegratedmitochondrialDNAdbMitBASE-Pilot-DbofS.cerevisiaenucleargenesinvolvedinmitochondrialbiogenesisHvrBase-PrimatesmtDNAcontrolregionsequencescompilation2021/5/949MitochondrionandchloroplastMOUSE-MitochondrialandOtherUsefulSEquences(humanandapesmit.DNAdb)MITOP-Mitochondrialproteins,genesanddiseasesAMmtDB-MetazoanmitochondrialDNAsequences

2021/5/950Insects

DrosophilaSWISS-PROTlist-LinkstoDrosophilaSWISS-PROTentriesFlyBase-Drosophilageneticandmoleculardb[MirroratEBI]FlyView-DrosophilaimagedbGIFTS-GeneInteractionsintheFlyTrans-WorldServerFlyNets-DbofmolecularinteractionsinDrosophilamelanogasterSOS-DGBD-DbofDrosophilaDNAsequencesannotatedwithregulatorybindingsitesMosquitoGenomics2021/5/951InvertebratesWormBase-C.elegansdb[MirroratSanger]C.elegansWWWserver-atUniversityofTexasSouthwesternACeDb-CaenorhabditiselegansdbC.elegansMitochondrialDirectory-DataonC.elegansgenesformitochondrialproteinsC.elegansEST-C.elegansESTdbfromJapan(YujiKohara'sgroup)C.elegansSWISS-PROTlist-LinkstoC.elegansSWISS-PROTentriesWormPep-C.elegansproteinsdbWormPD-C.elegansproteindb

2021/5/952InvertebratesDictysteliumGenomeSequencingprojectatBCMDictyosteliumdiscoideumgenomeprojectatIENADictyDb-DictyosteliumdiscoideumdbDicty_cDB-DictyosteliumdiscoideumcDNAproject

ConeshellsWebsite

ParasitegenomesdbandresourcesParasitegenomesWWWsite

PlasmoDB-P.falciparumgenomedb2021/5/953InvertebratesMalaria-WHO-Malariadb(fromWHO)（疟疾nue）P.falciparumSanger-P.falciparumgenomeprojectatSangerPFDB-PlasmodiumfalciparumGenomedb（疟原虫）P.falciparum-PlasmodiumfalciparumGeneSequenceTagproject2021/5/954InvertebratesMAD-MalariaAntigendbMalariaparasitemetabolicpathways

LGN-LeishmaniaGenomeNetworkTrypanosomabruceigenomeprojectTrypanosomacruzigenomeprojectkDNA-KinetoplastMinicircleSequencedb2021/5/955PlantsNAL-AGIS-AccesstomanyplantgenomedatabasesattheNationalAgriculturalLibraryDemeter'sgenomes-AccesstomanyplantgenomedatabasesattheUSDA-ARSMendel-PlantgenenomenclaturedatabasefromCPGNAtDB-ArabidopsisthalianagenomedatabaseTAIR-TheArabidopsisInformationResourceMATDB-MIPSArabidopsisthalianadbTIGRAtGI-TIGRArabidopsisthalianaGeneIndexAGR-ArabidopsisGenomeResource

2021/5/956PlantsBeanGenes-Beansgenomedb（豆）BeanRef-BeansgenomedbandotherresourcesChlamyDB-Chlamydomonasreinhardtiigenomedb衣藻(分类地位有争议的绿色双鞭毛单细胞生物)CropNet

-GenomemappingincropplantsCottonDB-Cottongenomedb（棉花）MaizeDb-Maizegenomedb（玉米）INRAMaize-INRAMaizegenomedbZmDB-MaizegenomedatabasePisumsativum(pea)website（豌豆）2021/5/957Plants-Rice

RGP-RiceGenomeResearchProgramRiceGenesR-MonsantoricegenomesiteTIGROsGI-TIGRRiceGeneIndexTIGRGmGI-TIGRSoybeanGeneIndexSnapdragon(A.majus)websiteSorghumDB-Sorghumgenomedb（高粱）SoyBase-Soybeangenomedb（大豆）2021/5/958PlantsSoyBasemetabolicdb-MetabolicsubsetofthesoybeangenomedbTIGRLeGI-TIGRTomatoGeneIndexDendrome-Foresttreesgenomedb2021/5/959FungiFGSC-FungalGeneticsStockCenterFGR-FungalGenomeResource

YeastSWISS-PROTlist-LinkstoS.cerevisiaeWWWsitesandtoSWISS-PROTentriesSGD-SaccharomycesgenomedbYPD-YeastproteindbMitBASE-Pilot-DbofS.cerevisiaenucleargenesinvolvedinmitochondrialbiogenesisYeastsnoRNA-YeastsmallnucleolarRNAsdbYTPdb-YeastTransportProteindbPathCalling-Yeastprotein-proteininteractiondb2021/5/960Fungi

AspergilluswebsiteC.albicansSWISS-PROTlist-LinkstoC.albicansWWWsitesandtoSWISS-PROTentriesCandidaalbicans-CandidaalbicansserverattheUniv.ofMinnesotaNGP-NeurosporacrassagenomeprojectPC-PneumocystiscariniigenomeprojectS.pombeSWISS-PROTlist-LinkstoS.pombeWWWsitesandtoSWISS-PROTentriesS.pombeNIH-Fissionyeast(S.pombe)serverattheNIH2021/5/961Fungi

PhycomycesWebsite-ResourcesiteforscientistsworkingonPhycomyces

EMGlib-Completelysequencedbacterialgenomesandtheyeastgenome2021/5/962BacteriaICB-IdentificationandClassificationofBacteriaWDCM-WorldDataCenterforMicroorganismsListofBacterialNameswithStandinginNomenclatureMDB-TIGRMicrobialdb<A>-GenomeinformationbrokerforMicrobialgenomesHOBACGEN-HomologousBacterialGenesdbComparisonofthetransportcapabilitiesofbacterialgenomes-fromIanPaulsenBPGD-Bacterialpolysaccharidegenedb（细菌多糖基因库）2021/5/963BacteriaBacterialquorumsensingMicrobeWorld-Educationalsiteonmicrobes

E.coliSWISS-PROTlist-LinkstoE.coliWWWsitesandtoSWISS-PROTentriesEcoWeb/EcoGene-VerycomprehensiveE.colidbECCE-E.coliCellEnvelopeProteinDataCollectionECDC-E.colidbcollectionEcoCyc-EncyclopediaofE.coligenesandmetabolism2021/5/964Bacteria

GenProtEC-E.coligenomeandproteomedbColibri-E.coligenomedbfromPasteurInsituteECGC-E.coliGenomeCenteratWisconsinUniversityDDBJE.coli-E.colihomepageatDDBJ

B.subtilisSWISS-PROTlist-LinkstoB.subtilisWWWsitesandtoSWISS-PROTentriesSubtiList-BacillussubtilisgenomicdbNRSub-Bacillussubtilisnon-redundantdb[MirrorinJapan]2021/5/965Bacteria

Micado-Microbialadvanceddb(B.subtilis+E.coli)(previouslyknownasMadBase)BSORF-JapaneseserveronB.subtilis

A.actinomycetemcomitans-ActinobacillusactinomycetemcomitansstrainHK1651genomeprojectB.stearothermophilus-Bacillusstearothermophilusstrain10genomeprojectB.pertussis-BordetellapertussisgenomeWWWsite（百日咳博德特氏菌）BbDB-TIGRBorreliaburgdorferigenomedb包柔氏螺旋体2021/5/966BacteriaiBGD-IntegratedBuchneragenomedbB.cepacia-BurkholderiacepaciagenomeprojectChlamydia-Chlamydiapneumoniaeandtrachomatis（衣原体）C.muridarum-TIGRChlamydiamuridarumstrainMoPngenomedbC.pneumoniaeAR39-TIGRChlamydiapneumoniaestrainAR39genomedbC.pneumoniaeJ138-JapaneseChlamydiapneumoniaestrainJ138genomedb2021/5/967BacteriaE.faecium-Enterococcusfaeciumgenomeproject（肠道球菌）C.acetobutylicum-GTCClostridiumacetobutylicumstrainATCC824dataC.jejuni-CampylobacterjejunistrainNCTC11168genomeWWWsiteC.hutchinsonii-CytophagahutchinsoniigenomeprojectDrDB-TIGRDeinococcusradioduransstrainR1genomedbD.hafniense-Desulfitobacteriumhafniensegenomeproject（脱硫细菌）2021/5/968BacteriaF.acidarmanus-FerroplasmaacidarmanusgenomeprojectF.tularensis-FrancisellatularensisgenomeWWWsiteH.influenzaeSWISS-PROTlist-LinkstoH.influenzaeWWWsitesandtoSWISS-PROTentriesHiDB-TIGRH.influenzaegenomedbHIDC-H.influenzaedbcollectionH.pyloriSWISS-PROTlist-LinkstoH.pyloriWWWsitesandtoSWISS-PROTentries2021/5/969BacteriaHpDB-TIGRHelicobacterpyloristrain26695genomedbH.pyloriJ99-AstraHelicobacterpyloristrainJ99genomedbPyloriGene-HelicobacterpylorigenmoicdbMC-1-MagnetococcusMC-1genomeprojectM.magnetotacticum-MagnetospirillummagnetotacticumgenomeprojectMycDB-MycobacteriumdbM.lepraeatGTC-GTCMycobacteriumlepraedataM.lepraeatSanger-SangerCentreM.lepraegenomeprojectTubercuList-MycobacteriumtuberculosisstrainH37RvgenomedbMtDB-TIGRMycobacteriumtuberculosisstrainOshkoshgenomedbM.tuberculosisatGTC-GTCMycobacteriumtuberculosisdata2021/5/970BacteriaM.tuberculosisatSanger-SangerCentreM.tuberculosisH37RvgenomeprojectM.tuberculosissecretedproteinsM.tuberculosisstructuralgenomicsconsortiumM.genitaliumSWISS-PROTlist-LinkstoM.genitaliumSWISS-PROTentriesMgDB-TIGRMycoplasmagenitaliumgenomedbM.pneumoniae-Mycoplasmapneumoniaegenomeproject2021/5/971Bacteria

N.meningitidisA-SangerCentreNeisseriameningitidisserogroupAstrainZ2491genomeprojectN.meningitidisB-TIGRNeisseriameningitidisserogroupBstrainMC58genomedbN.gonorrhoeae-NeisseriagonorrhoeaestrainFA1090genomeprojectN.europaea-Nitrosomonaseuropaeagenomeproject（亚硝化单胞菌）N.punctiforme-Nostocpunctiformegenomeproject2021/5/972BacteriaP.marinus-ProchlorococcusmarinusgenomeprojectP.aeruginosaproject-PseudomonasaeruginosagenomeprojectP.aeruginosadb-PseudomonasaeruginosagenomedbP.fluorescens-PseudomonasfluorescensgenomeprojectRhizobiumpNGR234aSWISS-PROTlist-LinkstoRhizobiump