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1、微信公众号:医学博士英语南京医科大学小白老师大阅读第 24 天 小白老师医学考博英语网络课程 Enhanced understanding of the microbiome is helping medicineWHEN, at the turn of the century, the first human genomes were sequenced, many biologists felt they had had delivered into their hands the keys to unlocking numerous puzzles about disease. Sinc
2、e then there has indeed been a fruitful effort to understand how the thousands of human genes which control hormones, enzymes and other molecules of the body serve to regulate health. But, in an unexpected turn of events, it is also now apparent that the human genome is not the only one to which att
3、ention should be paid. Human guts contain microbes, lots of them. Added together, the genes in these bugs genomes amount to perhaps 150 times the number in the human genome alone. If the bacteria in question were doing little more than swimming around digesting lettuce, this would be of small conseq
4、uence. But they are doing much more than that.The members of the microbiome, as this community is known, are, to a surprising extent, partners of humanity. And when that partnership goes wrong, the results can be dreadful. Inflammatory bowel disease, autism, multiple sclerosis, obesity, diabetes and
5、 chronic-fatigue syndrome all seem to have links with dysbiosis, as an imbalance in the microbiome is known. Only this month, there was news that human gut microbes influence the way patients respond to a popular new type of cancer treatment called immunotherapy. Certain sorts of bacteria are abunda
6、nt in patients who respond well. Antibiotics that kill these bacteria render immunotherapy less effective.Upgrade your inboxReceive our Daily Dispatch and Editors Picks newsletters.That finding illustrates an important idea. In effect, the antibiotics are editing the collective bacterial genome by r
7、emoving from it genes that somehow assistimmunotherapy. Much effort is now going into developing ways of editing the human genome, in order to improve human health. This is hard to do. But editing the microbial genome, by adding or subtracting particular speciesand thus the genes they carryis in pri
8、nciple far easier. That, too, could lead to improvements in human health. And many hopeful firms are now pursuing this idea.Much of the recent interest in microbiome medicine can be traced to a growing awareness of the usefulness of transplanting faeces, with their natural cargo of bacteria, from he
9、althy people into sick ones. It is an idea that goes back at least 1,700 years, which was when Chinese doctors began to use what was euphemistically called “yellow soup” to treat patients with severe diarrhoea. In a similar vein, warm camel dung has been employed in some parts of the world to treat
10、dysentery.These days, such faecal microbial transplants (FMTs) are used mainly to deal with the rampant multiplication of a diarrhoea-causing bug called Clostridium difficile in patients who have been heavily treated with antibiotics. The transplant alters the composition of the recipients microbiom
11、e in ways that make it hostile to C. difficile. A great deal of work has been directed to refining FMTs, both for use in C. difficile infections and, potentially, for treating other diseases tied to dysbiosis. New, encapsulated versions of FMTs are known colloquially as “crapsules”.Transplanting who
12、le microbiomes in this way is, though, a bit crude. Rebiotix, a firm based in Roseville, Minnesota, is developing a more refined approach: a standardised liquid suspension of healthy gut bacteria. Its most clinically advanced treatment is, as might be expected, for the prevention of recurring infect
13、ions of C. difficile. But the firm is also searching for therapies for paediatric ulcerative colitis (a form of inflammatory bowel disease), multi-drug-resistant urinary tract infections, infections of vancomycin-resistant Enterococci, and hepatic encephalopathy. This last illness is one of the most
14、 common complications of end-stage liver cirrhosis. Data suggest that part of its cause is ammonia generated by gut bacteria.Other firms are focusing their efforts even more precisely, by selecting and delivering only the microbes they believe are beneficial. This is an approach sometimes known as “
15、bugs as drugs”. Researchers at Seres Therapeutics, inCambridge, Massachusetts, for example, think that suitable combinations of particular microbes can catalyse shifts in entire bacterial ecosystemsspecifically, from ones that support disease to ones that support health. To this end, the firm is cre
16、ating proprietary mixtures with particular purposes. One of its clinical trials, for the treatment of recurrent C. difficile infection, failed and is being re-run with an altered design. A second is for ulcerative colitis. A third is intended for first-time infections of C. difficile.The opposite ap
17、proach to adding such “good” bacteria (and thus their genes) to the mix is to subtract the bad ones. That is the strategy employed by C3J Therapeutics, in Marina del Rey, near Los Angeles. This firm is developing an antimicrobial peptide (a small protein molecule) aimed specifically at Streptococcus
18、 mutans, a bug that lives in the mouth and which is widely believed to be the microbe mainly responsible for dental caries. C3Js drug, currently being tested for efficacy, is a non-specific antimicrobial peptide that has been joined with another peptide which binds only to S. mutans. Removing S. mut
19、ans leaves a vacant niche in the mouth. Although this is quickly filled by other species of Streptococcus, they are associated with a lack of cavities.Another way to subtract components of the microbiome is to use viruses, known as bacteriophages, that attack particular bacterial species. EpiBiome,
20、in San Francisco, and Eligo Biosciences, in Paris, are both hoping to deploy phages selectively against specific bacteriasomething that would create an extremely refined form of antibiotic. EpiBiome is trying to isolate the phages which are most effective in killing harmful bacteria. Eligo is attempting to fit phages out with a form of gene-editing technology that will cut up a
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