生物信息学期中作业_第1页
生物信息学期中作业_第2页
生物信息学期中作业_第3页
生物信息学期中作业_第4页
生物信息学期中作业_第5页
已阅读5页，还剩6页未读， 继续免费阅读

下载本文档

版权说明：本文档由用户提供并上传，收益归属内容提供方，若内容存在侵权，请进行举报或认领

文档简介

1、生物信息学期中考试班级： 姓名： 学号：AT3G594901、序列种类：蛋白质序列编号 来源物种：Arabidopsis thaliana（拟南芥） 基因来源：3号染色体 基因外显子数量：7个 序列位置：21984596-219863912、蛋白比对Range 1: 1 to 293GenPeptGraphicsNext MatchPrevious MatchScoreExpectMethodIdentitiesPositivesGaps594 bits(1531)0.0Compositional matrix adjust.293/293(100%)293/293(100%)0/293(0%

2、)Query 1 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQNSbjct 1 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60Query 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120 RLLSLLELIREGLPVFKDLKVM

3、VIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPPSbjct 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120Query 121 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEANSSQTSLCIDLSCCLQDT 180 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEANSSQTSLCIDLSCCLQDTSbjct 121 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEANS

4、SQTSLCIDLSCCLQDT 180Query 181 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELT 240 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELTSbjct 181 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELT 240Query 241 SFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 293 SFS

5、VPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVLSbjct 241 SFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 293Range 1: 1 to 293GenPeptGraphicsNext MatchPrevious MatchScoreExpectMethodIdentitiesPositivesGaps592 bits(1525)0.0Compositional matrix adjust.292/293(99%)292/293(99%)0/293(0%)Query 1 M

6、EVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQNSbjct 1 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60Query 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120 RLLSLLELIREGLPVFKDLKVMVIEDMIYLIN

7、VRSLPKFVSSSLDSEPELFFIDLEQDPPSbjct 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120Query 121 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEANSSQTSLCIDLSCCLQDT 180 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEA SSQTSLCIDLSCCLQDTSbjct 121 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEAKSSQTSLCIDLS

8、CCLQDT 180Query 181 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELT 240 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELTSbjct 181 KVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELT 24Query 241 SFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 293 SFSVPYDLSMEGSK

9、EVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVLSbjct 241 SFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 2933、DNA比对Range 1: 1 to 1035GenBankGraphicsNext MatchPrevious MatchScoreExpectIdentitiesGapsStrand1912 bits(1035)0.01035/1035(100%)0/1035(0%)Plus/PlusQuery 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCA

10、CTGAGTCTTATTGCGACAGAG 60 |Sbjct 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60Query 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120 |Sbjct 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120Query 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGA

11、GCAATTCCAAACGCC 180 |Sbjct 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180Query 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240 |Sbjct 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240Query 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTC

12、TTGAGCTCATCCGAG 300 |Sbjct 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300Query 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATAGAGGATATGATATACCTCA 360 |Sbjct 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATAGAGGATATGATATACCTCA 360Query 361 TAAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATT

13、CAGAACCCGAGTTGT 420 |Sbjct 361 TAAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATTCAGAACCCGAGTTGT 420Query 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480 |Sbjct 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480Query 481 TGGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACAT

14、TTCCTTTAGATGACA 540 |Sbjct 481 TGGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACATTTCCTTTAGATGACA 540Query 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600 |Sbjct 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600Query 601 TTGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAA

15、CCTTAAACGGATGGC 660 |Sbjct 601 TTGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAACCTTAAACGGATGGC 660Query 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720 |Sbjct 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720Query 721 ACCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCA

16、GGAATGGTACCACCG 780 |Sbjct 721 ACCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCAGGAATGGTACCACCG 780Query 781 AGAAGGACTCTCATTTAGAAGAGCTAACAAGTTTTTCAGTGCCATATGATCTGAGTATGG 840 |Sbjct 781 AGAAGGACTCTCATTTAGAAGAGCTAACAAGTTTTTCAGTGCCATATGATCTGAGTATGG 840Query 841 AAGGTAGCAAGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGA

17、GTTCAAGGTGGGAAG 900 |Sbjct 841 AAGGTAGCAAGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGAGTTCAAGGTGGGAAG 900Query 901 AATGCAAACACATTTGGAGATCATTAGATTTGCAAGTTTCTGAATGTTATCCTCAAGCAA 960 |Sbjct 901 AATGCAAACACATTTGGAGATCATTAGATTTGCAAGTTTCTGAATGTTATCCTCAAGCAA 960Query 961 TTGTGCTTTGAGGCTTTTTACATTTCAGACAGTTGTTCACTGAAC

18、TTGGTAAAGAGTTTT 1020 |Sbjct 961 TTGTGCTTTGAGGCTTTTTACATTTCAGACAGTTGTTCACTGAACTTGGTAAAGAGTTTT 1020Query 1021 TATTCATCAAAGTTA 1035 |Sbjct 1021 TATTCATCAAAGTTA 1035Range 1: 1 to 992GenBankGraphicsNext MatchPrevious MatchScoreExpectIdentitiesGapsStrand1796 bits(972)0.0992/1000(99%)8/1000(0%)Plus/PlusQue

19、ry 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60 |Sbjct 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60Query 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120 |Sbjct 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120Query 121 A

20、GTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180 |Sbjct 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180Query 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240 |Sbjct 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240Query 241 A

21、TGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300 |Sbjct 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300Query 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATAGAGGATATGATATACCTCA 360 |Sbjct 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATAGAGGATATGATATACCTCA 360Query 361 T

22、AAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATTCAGAACCCGAGTTGT 420 |Sbjct 361 TAAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATTCAGAACCCGAGTTGT 420Query 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480 |Sbjct 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480Query 481 T

23、GGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACATTTCCTTTAGATGACA 540 |Sbjct 481 TGGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACATTTCCTTTAGATGACA 540Query 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600 |Sbjct 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600Query 601 T

24、TGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAACCTTAAACGGATGGC 660 |Sbjct 601 TTGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAACCTTAAACGGATGGC 660Query 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720 |Sbjct 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720Query 721 A

25、CCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCAGGAATGGTACCACCG 780 |Sbjct 721 ACCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCAGGAATGGTACCACCG 780Query 781 AGAAGGACTCTCATTTAGAAGAGCTAACAAGTTTTTCAGTGCCATATGATCTGAGTATGG 840 | |Sbjct 781 AGAAGGACTCTCATTTAGAAGAGCTAACA-AGTGCCATATGATCTGAGTATGG 832Query 841 AAGGTA

26、GCAAGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGAGTTCAAGGTGGGAAG 900 |Sbjct 833 AAGGTAGCAAGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGAGTTCAAGGTGGGAAG 892Query 901 AATGCAAACACATTTGGAGATCATTAGATTTGCAAGTTTCTGAATGTTATCCTCAAGCAA 960 |Sbjct 893 AATGCAAACACATTTGGAGATCATTAGATTTGCAAGTTTCTGAATGTTATCCTCAAGCAA 952Query 961 TTGTGC

27、TTTGAGGCTTTTTACATTTCAGACAGTTGTTCAC 1000 |Sbjct 953 TTGTGCTTTGAGGCTTTTTACATTTCAGACAGTTGTTCAC 992Range 1: 1 to 880GenBankGraphicsNext MatchPrevious MatchScoreExpectIdentitiesGapsStrand1583 bits(857)0.0879/888(99%)8/888(0%)Plus/PlusQuery 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60

28、 |Sbjct 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60Query 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120 |Sbjct 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120Query 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180 |Sbj

29、ct 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180Query 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240 |Sbjct 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240Query 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300 |Sbj

30、ct 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300Query 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATAGAGGATATGATATACCTCA 360 | |Sbjct 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTCATAGAGGATATGATATACCTCA 36Query 361 TAAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATTCAGAACCCGAGTTGT 420 |Sb

31、jct 361 TAAATGTAAGAAGCCTGCCCAAGTTTGTAAGCTCCAGCTTAGATTCAGAACCCGAGTTGT 420Query 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480 |Sbjct 421 TCTTCATTGACTTGGAACAAGATCCTCCAAAGATGGTAACACAAAGCAAGGAAAGCAATC 480Query 481 TGGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACATTTCCTTTAGATGACA 540 |Sb

32、jct 481 TGGGGATGCAGCTTAGATCGATTCAGAAGCTATTCTCTTCGACATTTCCTTTAGATGACA 540Query 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600 |Sbjct 541 GCAATACTGATACCACTACGGTACTTGATGAGGCCAACTCTTCTCAGACTTCTTTATGCA 600Query 601 TTGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAACCTTAAACGGATGGC 660 |Sb

33、jct 601 TTGATCTTAGCTGTTGTTTACAAGACACTAAAGTTACAATCCCAACCTTAAACGGATGGC 660Query 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720 |Sbjct 661 TGCTGGACTATCCAGTTGTGTATCTATTTGGCACAGATCACATAGAAGAAGCAATCTACA 720Query 721 ACCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCAGGAATGGTACCACCG 780 |Sb

34、jct 721 ACCTATCCACCAAATCCCTCCGCCTATTCAAAGTTCTAGTATGCAGGAATGGTACCACCG 780Query 781 AGAAGGACTCTCATTTAGAAGAGCTAACAAGTTTTTCAGTGCCATATGATCTGAGTATGG 840 | |Sbjct 781 AGAAGGACTCTCATTTAGAAGAGCTAACA-AGTGCCATATGATCTGAGTATGG 832Query 841 AAGGTAGCAAGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGAGTT 888 |Sbjct 833 AAGGTAGCA

35、AGGAAGTGTGGGCTGAAAAATTTCTGGAGAGGATGAGTT 880Range 1: 1 to 811GenBankGraphicsNext MatchPrevious MatchScoreExpectIdentitiesGapsStrand1498 bits(811)0.0811/811(100%)0/811(0%)Plus/PlusQuery 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACTGAGTCTTATTGCGACAGAG 60 |Sbjct 1 TCCTCTAAGAACAAAACGTCCGATAGAGAAAGGGTATCACT

36、GAGTCTTATTGCGACAGAG 60Query 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120 |Sbjct 61 AAGAAGAAAGCTCCAATTTTTCTGCGAATATGGAGGTTCCAAGCTCTGAGGAACTACTTC 120Query 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAGAGCAATTCCAAACGCC 180 |Sbjct 121 AGTTTCTGAGTTCTTGCCTCTCTCAGATCAAATGGAGACTCAAG

37、AGCAATTCCAAACGCC 180Query 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240 |Sbjct 181 GTCTCGAAATAGATGTTCTGGCATTATGCACAGGAATGAGACCAGTTGTGATGATTGACT 240Query 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300 |Sbjct 241 ATGGTGGAAAGATGCCTGAGCTACAGAATCGTTTGCTGTCACTTCTTGAGCTCATCCGAG 300Query 301 AGGGTTTACCAGTTTTTAAAGATCTGAAGGTTATGGTTATA

人人文库> 全部分类> 教育资料 > 课件下载

温馨提示

  • 1. 本站所有资源如无特殊说明，都需要本地电脑安装OFFICE2007和PDF阅读器。图纸软件为CAD,CAXA,PROE,UG,SolidWorks等.压缩文件请下载最新的WinRAR软件解压。
  • 2. 本站的文档不包含任何第三方提供的附件图纸等，如果需要附件，请联系上传者。文件的所有权益归上传用户所有。
  • 3. 本站RAR压缩包中若带图纸，网页内容里面会有图纸预览，若没有图纸预览就没有图纸。
  • 4. 未经权益所有人同意不得将文件中的内容挪作商业或盈利用途。
  • 5. 人人文库网仅提供信息存储空间，仅对用户上传内容的表现方式做保护处理，对用户上传分享的文档内容本身不做任何修改或编辑，并不能对任何下载内容负责。
  • 6. 下载文件中如有侵权或不适当内容，请与我们联系，我们立即纠正。
  • 7. 本站不保证下载资源的准确性、安全性和完整性, 同时也不承担用户因使用这些下载资源对自己和他人造成任何形式的伤害或损失。

最新文档

评论

0/150

提交评论