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APPLICATIONNOTECTSRoteaCounterflowCentrifugationSystem
Closed,automatedwashandconcentrationofexpandedhumannaturalkiller(NK)cells
ImprovetheefficiencyofNKcellprocessingwiththeCTSRoteaCounterflowCentrifugationSystemandCTSNK-XpanderMedium
Introduction
Oneofthekeychallengesfacedbythecellandgenetherapyindustryispoorefficiencyincellprocessing.Akeyimprovementbeingmadeistheshifttowardclosedandautomatedsystems,whichcanhelpreducethe
riskofcontaminationanderror,aswellasprovidetheabilitytoprocessmultipleproductsinparallelinlesscontrolledspaces.
TheGibco™CTS™Rotea™CounterflowCentrifugation
Systemisaclosedcellprocessingsystemdeveloped
specificallyforsmall-batchcelltherapymanufacturing.
Itprovidesoutputvolumesaslowas5mLwithhigh
cellrecoveryandviability,andiscontrolledviauser-
programmablesoftwaretoenablecreationofprotocolsformanydifferentprocesses.TheCTSRoteasystemhasbeensuccessfullyusedinvariousstepsoftheCART
cellprocessingworkflow,includingisolationofperipheralbloodmononuclearcells(PBMCs),cellwashing,and
concentrationofengineeredCARTcells.
HerewedemonstrateuseoftheCTSRoteaCounterflowCentrifugationSystemforautomatedwashingand
concentrationofhumanNKcellsexpandedinGibco™CTS™NK-Xpander™Medium(Figure1).
Materialsandmethods
EnrichedNKcellswereexpandedinCTSNK-Xpander
Medium,harvestedonday17,washed,andconcentrated
usingtheCTSRoteaCounterflowCentrifugation
System.Subsequenttothis,phenotypicandfunctionalcharacterizationwasperformed.
ABCDEFG
H
2
2
1
FORWARD
Figure1.CTSRoteaCounterflowCentrifugationSystemandCTSNK-XpanderMedium.
Expand
Washandconcentrate
Analyze
•CTSNK-XpanderMedium
•IL-2recombinanthumanprotein
•HumanABserum
•CTSRotea
Counterflow
CentrifugationSystem
(instrument,
software,andsingle-usekits)
•CTSDPBS,bagformat
•Countess
AutomatedCellCounter
•Stainingsolutions
•AttuneNxT
AcousticFocusingCytometer
•Monoclonalantibodies
ThermoFisher
SCIENTIFIC
Feeder-freeNKcellexpansionandactivation
EnrichedCD56⁺NKcellsfromPBMCswereculturedpertheCTSNK-XpanderMedium
protocol
andscaledup
toafinalvolumeof1.5L.Briefly,NKcellswereplatedat
1.25x10⁵cells/mLat200µLperwellinThermoScientific™
Nunc™non-treated96-wellplatesandculturedfor
17daysinCTSNK-XpanderMedium(Cat.No.A5019001)containing500U/mLrecombinanthumanIL-2(Cat.No.
PHC0023)and5%humanABserum(FisherScientific
Cat.No.BP2525100).Thecellswerefedevery2–3daysbeginningonday5tomaintainanoptimalcelldensityof4–5x10⁵cells/mL.Ascellsgrew,theyweretransferred
frominitial48-wellplatesandsplitintomultiple6-well
plates,thenT-75flasks,andfinallytomultipleT-175
non–tissueculturetreatedflaskstoafinalvolumeof1.5L.CellswerestainedwithtrypanblueandcountedusingtheInvitrogen™Countess™IIFLAutomatedCellCounter.
Closed,automatedwashingandconcentrationofexpandedNKcells
Followingexpansion,NKcellwashingandconcentrationwereperformedusingtheCTSRoteaCounterflow
CentrifugationSystem.Priortoloadingontothe
CTSRoteasystem,asingle-usekitwasconstructed
usingbagconnectionsmadeviastandardwelding
techniques(Figure2).TheCTSRoteaSystemwasprimedbyreplacingairinthesystemwithbuffer.Thecellswereloadedintothechambertoformafluidizedbed.Fresh
washbuffer,consistingofGibco™CTS™DPBS(withoutCaCl2andMgCl2)and2%humanserumalbumin(NovaBiologics,Cat.No.68982-0643-02),wasallowedtoflow
throughthebedtowashthecells.Thecellswerethenconcentratedandharvestedfromthesystemforfurtherdownstreamprocessing.
Collectcells
Primesystem
Washcells
Loadcellsinchamber
AllCTSRoteaSystemprotocolswerewrittenusing
theGibco™CTS™Rotea™ProtocolBuilderdesktop
application.Table1liststhestepsoftheNKcellwashingandconcentrationprotocol,andFigure2illustratestheconfigurationoftheGibco™CTS™Rotea™Single-UseKit.
DGNKcellsinmedium
0mL
Figure2.CTSRoteaSingle-UseKitconfigurationforNKcellwashingandconcentration.
BDPBS+2%HSA
250mL
Celloutputbag
0mL
H
AWaste
0mL
Table1.SequenceofNKcellwashingandconcentrationprotocolontheRoteasystem,includinginitialprimingsteps.
StepDescriptionFlowpathSpeedFlowrateSteptypeTrigger
Primingsequence
1Pre-primeBtoA0xg100mL/minNormalInputbubblesensor
2
Lubricaterotarycoupling
BtoA
0xg
100mL/min
Normal
Volume:15mL
3
PrimechamberandlineA
BtoA
10xg
100mL/min
Normal
Volume:15mL
4
Addprimingvolume
BtoA
10xg
100mL/min
Normal
Volume:50mL
5
PrimebubbletrapandlineB
AtoB
10xg
100mL/min
Normal
Volume:15mL
6
PrimelineD
AtoD
10xg
50mL/min
Normal
Volume:5mL
7
Pressureprime
AtoEF
10xg
0mL/min
Pressureprime
8
Primepause
JtoK
10xg
25mL/min
Pause
Volume:3mL
9
Rampspeedtoinitiatebed
JtoK
2,200xg
50mL/min
Pause
Time:10sec
LoadingandwashingtheNKcells
10
Initiatebed
DtoG
2,200xg
50mL/min
Normal
Time:4min
11
Loadinputmaterial
DtoA
2,250xg
35mL/min
Normal
Volume:1xinputaliquot(mL)Inputbubblesensor,pause
12
Adjustspeedforwash
JtoK
2,400xg
25mL/min
Pause
Time:15sec
13
Wash
BtoA
2,400xg
25mL/min
Normal
Volume:30mL
14
Concentratebedforharvest
JtoK
2,500xg
15mL/min
Pause
Time:10sec
15
Harvest
BtoH
2,500xg
50mL/min
Harvest
Volume:1xharvestvolume(mL)
16
Ramptostop
KtoJ
500xg
50mL/min
Pause
Time:5sec
NKcellphenotypiccharacterization
ExpandedNKcellsweregatedforlivecellsusing
Invitrogen™LIVE/DEAD™FixableVioletDeadCellStainKit.TheirCD56,CD3,andCD16levelswerethenmeasuredusingappropriateantibodiesandtheInvitrogen™Attune™NxTAcousticFocusingCytometer.
NKcellfunctionality
NKeffectorcellsexpandedinCTSNK-XpanderMediumwerecoincubatedwithK562targetcellslabeledwith
theInvitrogen™CellTrace™CFSECellProliferationKitatNK:K562cellratiosof0.625:1,1.25:1,2.5:1,and5:1for
2hours.Followingincubation,degranulationwasassessedbasedontheexpressionofCD107abyCD56⁺NKcells,
measuredontheAttuneNxTAcousticFocusingCytometer.NKcellcytotoxicitywasassessedbymeasuringK562celldeathontheAttuneNxTsystembygatingforCFSE-labeledK562cellsandmeasuringthepercentageofdeadcells
usingtheLIVE/DEADstainkit.
Results
NKcellswereexpandedto1.83x10⁹cellsinafinalvolumeof1.62LusingCTSNK-XpanderMedium.
CellswashedandconcentratedusingtheCTSRotea
CounterflowCentrifugationSystemshowedhighrecoveryandviabilitypostwashandmaintainedtheirphenotypeandfunctionality.
Feeder-freeNKcellexpansionandactivation
PBMC-derivedNKcellsculturedinCTSNK-Xpander
Mediumexpandedby1,700-foldonaverageafter17days(Figure3).Theculturesstartedat1.13x10⁶cellsin9mLandincreasedto1.83x10⁹cellsin1.62L.
Foldexpansion
2,000
1,500
1,000
500
0
05710121417
Run1Run2Time(days)
Figure3.FoldexpansionofNKcellsculturedinCTSNK-XpanderMediumfor17days.
Closed,automatedwashingandconcentrationofexpandedNKcells
ExpandedcellswereloadedintotheCTSRoteasystemtoformastabilizedbedforsubsequentwashingin
CTSDPBS.Recoverywas~90%withhighviabilityandmaintenanceofcellularphenotype(Figure4).
A
120
89%
96%97%
100
Percentage
80
60
40
20
0
InputOutputRecovery
viabilityviability
Pre-wash
B
Post-wash
C
Figure4.NKcellwashingandconcentration.(A)NKcellviabilityandrecoveryaveragedoverfourwashingandconcentrationruns.(B)FlowcytometrystainingforCD56,CD16,andCD3beforeandafterwashingwiththeCTSRoteaSystemNKcellwashandconcentrationprotocol.
(C)CTSRoteaSystemsoftwareimagewithachamberofNKcellsinafluidizedbed.
NKcellfunctionality
CellswashedandconcentratedusingtheCTSRoteasystemmaintained
cytolyticfunctionandwereabletodegranulate(Figure5)andkillK562targetcells(Figure6)inadose-dependentmanner.
NKcellsonly
CCD--A::SSCACCD-A::SSC-A
Degranulation(%)
100
90
80
70
60
1.0M
800K
600K
400K
200K
0
CD107a
50
40
30
20
10
0
NKcells+K562cells1.0M
800K
600K
400K
200K
0
CD107a
Post-RoteaPre-Rotea
0.625:11.25:12.5:1
Efector:targetratio
5:1
Figure5.MaintenanceofNKcelldegranulationcapabilityafterwashingandconcentration.
K562cellsonly
100
Court
K562celldeath(%)
90
80
70
60
50
800
600
400
200
0
LIVE/DEADViolet
NKcells+K562cells
40
800
30
600
Court
20
400
10
200
0
0
LIVE/DEADViolet
Post-RoteaPre-Rotea
0.625:11.25:12.5:1
Efector:targetratio
5:1
Figure6.MaintenanceofNKcellcytotoxicityafterwashingandconcentration.
Conclusions
Criticalimprovementstocellandgenetherapymanufacturingcanbeachievedbyreducingriskandhands-ontimeusingregulation-compliantreagents
andclosedmanufacturingsystems.WehavedemonstratedefficientNKcellexpansioninafeeder-freeculturesystemaswellashighrecoveryafter
washingandconcentratingthecellsusingaclosed,automatedcounterflowcentrifugationsystem.Herewehavedemonstratedefficientexpansionof
NKcellsinafeeder-freeculturesystemusingCTSNK-XpanderMedium,andhighrecoveryofcellsduringwashandconcentrationusingtheCTSRotea
CounterflowCentrifugationSystem.
gibco
Orderinginformation
ProductQuantityCat.No.
Expansion
500mLbottleA5019001
CTSNK-XpanderMedium
5LbagA5019002
HumanIL-2RecombinantProtein
1mg
PHC0023
HumanABSerum
100mL
FisherScientific,BP2525100
Nuncnon-treated96-wellplates
Caseof160
268200
Nuncnon-treated48-wellplates
Analysis
Caseof75
150787
Countess3FLAutomatedCellCounter
1instrument
AMQAF2000
TrypanBlueSolution,0.4%
100mL
15250061
CellTraceCFSECellProliferationKit
1kit
C34570
eBioscienceFlowCytometryStainingBuffer
600mL
004222-26
FcReceptorBindingInhibitorPolyclonalAntibody
100tests
14-9161-73
UltraCompeBeadsCompensationBeads
100tests
01-2222-42
ArCAmineReactiveCompensationBeadKit
1kit
A10346
AttuneNxTAcousticFocusingCytometer
1instrument
A24858
CD56MonoclonalAntibody(CMSSB)
100tests
120567-42
CD3MonoclonalAntibody(OKT3)
100tests
11-0037-
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