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生物信息学资源库介绍第1页,课件共80页,创作于2023年2月

生物信息学相关数据库资源

核酸及其相关数据库(序列数据库、基因组相关数据库、核酸三维结构数据库、其他)蛋白质相关数据库(序列数据库、蛋白质三维结构数据库、蛋白质组数据库(二维凝胶电泳数据库)、信号传导及蛋白质-蛋白质相互作用相关数据库、DNA和蛋白质相互作用数据库)基因或蛋白质一些特定数据库糖类及其相关数据库蛋白质翻译后修饰相关数据库基因表达数据库人类基因突变及疾病相关数据库进化相关数据库及资源专利数据库资源目录服务器或网页第2页,课件共80页,创作于2023年2月核酸及其相关数据库

核酸序列数据库

BIOSINO

我国的核酸序列公共数据库EMBL-EMBLNucleotidesequencedatabase(EBI)*GenBank-GenBankNucleotideSequencedatabase(NCBI)*DDBJ-DNADataBankofJapan*dbEST-DatabaseofExpressedSequenceTags

(NCBI)dbSTS-DatabaseofSequenceTaggedSites(NCBI)第3页,课件共80页,创作于2023年2月2.基因组及相关数据库

GenomicDatabasesGenomeWeb(HGMP)-AcatalogueofusefulWebsitesforGenomicswithasetofcollectionsofgenomedatabases

GSDB-GenomeSequencedatabase(NCGR)GOLD-GenomesOn-linedb一些数据库的直接链接第4页,课件共80页,创作于2023年2月3.核酸三维结构数据库NDB-NucleicAcidDatabank(3Dstructures)BNASDB-NucleicacidstructuredbfromUniversityofPune第5页,课件共80页,创作于2023年2月4.其他AsDb-AberrantSplicingdbACUTS-AncientconserveduntranslatedDNAsequencesdbCodonUsageDb

-ThefrequencyofcodonuseineachorganismismadesearchablethroughthisWorldWideWebsite.EPD-EukaryoticPromoterdbHOVERGEN-HomologousVertebrateGenesdbIMGT-ImMunoGeneTicsdb[MirroratEBI]ISIS-IntronSequenceandInformationSystemRDP-RibosomaldbProjectgRNAsdb-GuideRNAdbPLACE-Plantcis-actingregulatoryDNAelementsdb第6页,课件共80页,创作于2023年2月其它PlantCARE-Plantcis-actingregulatoryDNAelementsdbsRNAdb-SmallRNAdbssurRNA-SmallribosomalsubunitdblsurRNA-Largeribosomalsubunitdb5SrRNA-5SribosomalRNAdbtmRNAWebsite

tmRDB-tmRNAdBtRNA-tRNAcompilationfromtheUniversityofBayreuthuRNADB-uRNAdb第7页,课件共80页,创作于2023年2月其他RNAediting-RNAeditingsiteRNAmoddb-RNAmodificationdbTelDB-MultimediaTelomereResourceTRADAT-TRAnscriptionDatabasesandAnalysisToolsSubviralRNAdb-SmallcircularRNAsdb(viroidandviroid-like)第8页,课件共80页,创作于2023年2月TransgenicsCreTransgenicDatabase-CretransgenicmouselinesTransgenic/TargetedMutationDatabase-Informationontransgenicanimalsandtargetedmutations第9页,课件共80页,创作于2023年2月1.蛋白质序列和相关数据库SWISS-PROT-SWISS-PROTannotatedproteinsequencedbPIR-international-TheProteinInformationResource(proteinsequence)MIPS-Martinsriedinstituteforproteinsequenceandhomologydataandyeastgenomeinformation第10页,课件共80页,创作于2023年2月蛋白质及其相关数据库

PROSITE-PROSITEdictionaryofproteinsitesandpatternsInterPro-IntegratedResourcesofProteinsDomainsandFunctionalSitesBLOCKS-BLOCKSdbDOMO-Proteindomaindb(Automaticallygenerated)Pfam-Proteinfamiliesdb(HMMderived)[MirroratSanger]PRINTS-ProteinMotiffingerprintdbProDom-Proteindomaindb(Automaticallygenerated)PROTOMAP-AnautomatichierarchicalclassificationofSWISS-PROTproteinsSBASE-SBASEdomaindb(Proteindomainsequencelibrary)SMART-Proteinsignallingandextracellulardomainpatterns(SimpleModularArchitectureResearchTool)ProClass-Proteinsequencealignmentsandcurationofproteinfamilies第11页,课件共80页,创作于2023年2月.蛋白质三维结构和相关数据库PDB-ProteinDataBank[MirrorsinEBI]BioMagResBank-Repositoryfordataonproteins,peptides,andnucleicacidsfromNMRspectroscopySWISS-MODELRepository-AutomaticallygeneratedproteinmodelsdbModBase-DbofcomparativeproteinstructuremodelsCATH-UCLBSMstructuralclassificationofproteinsSCOP-Structuralclassificationofproteins[MirroratUSA|Israel|Singapore|Australia]Mol_R_Us-MoleculesRUs,browserforPDBBMMDomainServer-BiomolecularModellingLaboratory(ICRF)proteindomainserverPRESAGE-Collaborativeresourceforstructuralgenomics第12页,课件共80页,创作于2023年2月蛋白质三维结构和相关数据库SBASE-SBASEdomaindb(Proteindomainsequencelibrary)SMART-Proteinsignallingandextracellulardomainpatterns(SimpleModularArchitectureResearchTool)ProClass-ProteinsequencealignmentsandcurationofproteinfamiliesKabat-KabatdbofproteinofimmunologicalinterestPMD-ProteinMutantdb第13页,课件共80页,创作于2023年2月蛋白质二维凝胶电泳数据库WORLD-2DPAGE-Acompleteindexof2DdbandserversPhoretixlinks-Phoretixpageoflinksto2Dgeldb第14页,课件共80页,创作于2023年2月信号传导及蛋白质-蛋白质相互作用相关数据库DIP-DbofInteractingProteinsINTERACT-Protein-ProteininteractiondbProNet-Protein-Proteininteractiondb

CANSITE-SignalTransduction'sWebSPAD-SignalingpathwaydbCSNDB-CellSignalingNetworksdb第15页,课件共80页,创作于2023年2月DNA和蛋白质相互作用数据库

DPInteract-DNA-Proteinsinteractionsdb第16页,课件共80页,创作于2023年2月特定基因或蛋白质的数据库AAA-AAAfamilyofATPasesserverAcetylcholinesterases

ALDH-AldehydedehydrogenasegenesuperfamilydbAminoacyl-tRNAsynthetasesinSWISS-PROT-Listofaminoacyl-tRNAsynthetasesinSWISS-PROTAARSDB-Aminoacyl-tRNAsynthetasesdbAllergensinSWISS-PROT-NomenclatureandindexofallergensinSWISS-PROT第17页,课件共80页,创作于2023年2月特定基因或蛋白质的数据库AMSDb-AntimicrobialsequencesdbAntibodyresourcepage-LinkstoantibodyrelatedWebresourcesAustralianvenomandtoxindb

BacillusthuringiensistoxinspecificitydbTFII-BasaltranscriptionfactorsBloodgroupantigensinSWISS-PROT

BCGD-BreastcancergenesdbfromMBCRBRENDA-Dbofenzymefunctionaldata第18页,课件共80页,创作于2023年2月特定基因或蛋白质的数据库EF-handCaBP-EF-handcalcium-bindingproteinsdbCAZy-Carbohydrate-ActiveenZYmesWebsiteCBSdomain-CystathionineBetaSynthasedomainWWWpageCDantigensinSWISS-PROT-Nomenclatureforsurfaceproteinsofhumanleucocytes(CD)第19页,课件共80页,创作于2023年2月特定基因或蛋白质的数据库CDantigensinPROW-DatabaseoninformationaboutCDantigensChaperonin-InformationonGroELandGroESchaperoninsConotoxins-InformationonconotoxinsfromaWebsiteonconeshells。。etc。。第20页,课件共80页,创作于2023年2月糖类相关数据库

CarbBank-ComplexCarbohydrateStructureDatabaseGlycoSuiteDB-DbofglycanstructuresTGN-TheGlycoscienceNetworkFCCA-ForumCarbohydratesComingofAgeCARBHYD-CarbohydrateinformationWWWsitesMonosacharidebrowser-SpacefillingFischerprojectionformonosaccharides

第21页,课件共80页,创作于2023年2月蛋白质翻译后修饰相关数据库

O-GlycBase-O-glycosylatedproteinsdbPhosphoBase-PhosphorylationsitesdbRESID-DbofAminoAcidModifications第22页,课件共80页,创作于2023年2月

基因表达数据库

ASDB-Proteinproductsandexpressionpatternsofalternatively-splicedgenesAxeldb-GeneexpressioninXenopusBodyMap-HumanandmousegeneexpressiondataEpoDB-GenesexpressedinvertebrateRBCFlyView-DrosophiladevelopmentandgeneticsGeneExpressionDatabase(GXD)-MousegeneexpressionandgenomicsKidneyDevelopmentDatabase-Kidneydevelopmentandgeneexpression第23页,课件共80页,创作于2023年2月基因表达数据库

MAGEST-Ascidian(Halocynthiaroretzi)geneexpressionpatternsMouseAtlasandGeneExpressionDatabase-Spatially-mappedgeneexpressiondataPEDB-NormalandaberrantprostategeneexpressionToothDevelopmentDatabase-GeneexpressionindentaltissueTRIPLES-TRansposon-InsertionPhenotypes,LocalizationandExpressioninSaccharomyces第24页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库

HMGD-HumanGeneMutationdbSVD-SequencevariationdbHGBASE-HumanGenicBi-AllelicSequencesdbTheSNPconsortium

dbSNP-Humansinglenucleotidepolymorphism(SNP)dbListofmutationdatabasesfromOMIM

ListofmutationdatabasesfromIMT(Finland)

第25页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库

ADB-Albinismdb(Mutationsinhumangenescausingalbinism)Alpha-glucosidase-Informationabouthumanacidalpha-glucosidase(GSD-II)ARmutations-HumanandrogenreceptormutationdbAntithrombinmutationdb

AsthmaandAllergygenedb

BIOMDB-DbofmutationscausingtetrahydrobiopterindeficienciesBLMbase-HumanBLMmutationdb(Bloomsnydrom)第26页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库BTKbase-HumanBTKmutationdb(X-linkedagammaglobulinemia)CD40Lbase-HumanCD40ligandmutationdbCOL1/3mutation-HumanTypeIandIIIcollagenmutationdbCFTRmutation-Humancysticfibrosismutationdb(CFTR)EMDdb-HumanEmerin(EMD)mutationdb(Emery-Dreifussmusculardystrophy)KMeyeDB-Eyediseasegenesdb第27页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库FVIImutation-HumanFactorVIImutationdbHAMSTeRS-HumanFactorVIIImutationdb(HaemophiliaA)HAeMB-HumanFactorIXmutationdb(HaemophiliaB)FBN1mutation-Humanfibrillin1mutationdb(Marfansyndrome)G6PD-HumanG6PDdeficiencyresourceGaltmutation-Humangalactose-1-phosphateuridylyltransferasemutationdb(Galactosemia)第28页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库HEXAdb-HumanHexosaminidaseAmutationdb(Tay-sachsdisease)IL2RGbase-HumanIL2RG(Interleukin-2receptorgamma)mutationdb(X-SCID)L1CAMmutation-HumanL1CAMmutationdbLDLRmutation-HumanLDLRmutationdb(Familialhypercholesterolemia)LQTSdb-LongQTsyndromedbNCF1base-HumanNCF1mutationdbNCF2base-HumanNCF2mutationdb第29页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库Neuromusculardiseaseswebsite

NCL-NeuronalCeroidLipofuscinosesmutationdbOTCase-Humanornithinetranscarbamylase(OTCase)websiteCytochromeP450allelesnomenclature

p53mutationdb-UniversityofTokyop53mutationdbGermlinep53mutationdb-UniversityofPraguedbofgermlinep53mutationsPAHdb-Humanphenylalaninehydroxylase(PAH)mutationdb第30页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库PAX6mutation-HumanPAX6mutationdbPrion-PrionandpriondiseasewebsiteRAG1base-HumanRAG1mutationdbRAG2base-HumanRAG2mutationdbRB1base-Humanretinoblastoma-associatedprotein(RB)mutationdbRetNet-RetinalInformationNetworkRetinaInternationalScientificNewsletter-InformationonRetinalgenes,proteinsanddiseases第31页,课件共80页,创作于2023年2月人类基因突变及疾病相关数据库TSC-TSC(TSC1/TSC2)variationdbTSC2-Cardiff-RotterdamTuberousSclerosis(TS)db(Tuberin;TSC2)TGDB-TumorgenedbVMD2mutation-HumanVMD2mutationdbvWFmutation-HumanvonWillebrandfactor(vWF)mutationdbWRN-HumanWRNmutationdb(Warnerdisease)WT1mutation-HumanWT1mutationdbX-ALDmutation-HumanABCD1mutationdb

第32页,课件共80页,创作于2023年2月进化相关数据库及资源

ClustersofOrthologousGroups(COG)-Phylogeneticclassificationofproteinsfrom21completegenomesXREFdb-Cross-referencingofmodelorganismgeneticswithmammalianphenotypes

TreeBASE-RelationaldbofphylogeneticinformationTheTreeoflife-CollectionofWWWpagesonphylogenyandbiodiversityoforganisms第33页,课件共80页,创作于2023年2月

专利数据库

DPD-DNAPatentdbAgPatents-AgriculturalBiotechnologypatentsfromtheUSDAUSPTOpatentdb-USAPatentandTrademarkOfficepatentdbEsp@cenet-PatentinformationdatabasefromtheEuropeanPatentOffice(worldwidecoverage)TheDelphionIntellectualPropertyNetwork(IPN)

forsearching,viewing,andanalyzingpatentdocuments.第34页,课件共80页,创作于2023年2月

资源目录服务器或网页

BioCatalog-TheBioCatalogatEBIYellowBAGI-BioAccessGuidetotheInternetatHoustonUniversitySoftwarelibraryfromG

DBCAT-DatabasescatalogatINFOBIOGENMBDL-MolecularBiologyDatabaseList

Amos'WWWlinkspage

NucleicAcidsResearchdatabaseissue第35页,课件共80页,创作于2023年2月HumanCEPH-genotypedatabaseCEPHhomearesearchlaboratorywhichconstructsmapsofthehumangenomeGeneMap'99-AGeneMapoftheHumanGenome(NCBI)OMIM-OnlineMendelianInheritanceinManGENATLAS-HumangenesatlasGeneClinics-MedicalgeneticsknowledgebaseGDB-HumangenesandgenomicmapsGeneCards-Dbintegratinginformationonhumangenes第36页,课件共80页,创作于2023年2月HumanUDB-UnifieddbforHumangenomemappingEnsembl-HumangenomeannotationssiteUCSChumangenomeworkingdraft

TIGRHGI-TIGRHumanGeneIndexHumanBACEndsDatabase-Non-redundanthumanBACendsequencesHsUniGene-HumantranscriptsinGenBank(ESTclusters)STACK-SequenceTagAlignmentandConsensusKnowledgebase(DbofconsensushumanESTs)第37页,课件共80页,创作于2023年2月HumanA-Humanpredictedgeneindex/catalogGenLink-HumangeneticsresourceGENOTK-HumancDNAdbHUGE-HumanUnidentifiedGene-EncodedlargeproteinscDNA(KIAA...)CGAP-CancerGenomeAnatomyProjectSCDb-Stemcelldb第38页,课件共80页,创作于2023年2月HumanHuGeMap-HumangenomegeneticandphysicalmapdataG3-RH-StanfordG3andTNGradiationhybridmapsGB4-RH-Genebridge4(GB4)humanradiationhybridmapsRadiationHybridDatabase-Radiationhybridmapdata第39页,课件共80页,创作于2023年2月Humanchromosome1~8Chr1-Humanchromosome1atRockefellerUniversity[MirroratEBI]Chr3-Humanchromosome3dbattheUniversityofTexasHealthScienceCenterChr7-Humanchromosome7dbatOntario'sHospitalforSickChildrenChr8SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome8第40页,课件共80页,创作于2023年2月Humanchromosome9~11Chr9SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome9Chr9-Humanchromosome9dbChr10SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome10GTCChr10data-Humanchromosome10datafromGenomeTherapeuticsCorporationChr11SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome1111DB-Humanchromosome11dbatImperialCollege(U.K.)第41页,课件共80页,创作于2023年2月Humanchromosome12~16Chr12SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome12Chr13-Humanchromosome13dbatColumbiaChr14SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome14Chr15SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome15Chr15UBC-Humanchromosome15WWWpageatUBCChr16SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome16第42页,课件共80页,创作于2023年2月Humanchromosome16~19Chr16LANL-Humanchromosome16dbatLosAlamosNationalLaboratoryChr16TIGR-Humanchromosome16dbatTIGRChr17SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome17Chr18SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome18Chr18-Humanchromosome18atBostonChildren'sHospitalChr19SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome19第43页,课件共80页,创作于2023年2月Humanchromosome20~22Chr20SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome20Chr21SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome21Chr21atRIKEN-Humanchromosome21genomesiteatRIKEN(Japan)Chr21atERI-Humanchromosome21genomicsequencedbfromtheEleanorRooseveltInstituteChr22SWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosome22Chr22atSanger-SangerCenterchromosome22projectChr22atHGC-Humangenomecenterforchromosome22第44页,课件共80页,创作于2023年2月HumanchromosomeX~YChrXSWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosomeXIXDB-IntegratedXchromosomedbChrYSWISS-PROTlist-LinkstoSWISS-PROTentriesfromhumanchromosomeY

DRESH-HumancDNAcloneshomologoustoDrosophilamutantgenes第45页,课件共80页,创作于2023年2月VertebratesOMIA-OnlineMendelianInheritanceinAnimalsMGI-MouseGenomeInformatics(includesMouseGenomeDatabase(MGD))[MirrorsinAustralia|UK|Japan]TIGRMGI-TIGRMouseGeneIndexMmUniGene-MousetranscriptsinGenBank(ESTclusters)RatMAP-RatgenomedbTIGRRGI-TIGRRatGeneIndexRnUnigene-RattranscriptsinGenBank(ESTclusters)第46页,课件共80页,创作于2023年2月VertebratesBovBASE-Bovinegenomedb(inUK)BOVMAP-Bovinegenomedb(inFrance)Ark-Cat-CatgenomedbHorseBASE-HorsegenomedbDGP-DogGenomeProjectPiGBASE-PiggenomedbSheepBASE-Sheepgenomedb(alsoknownasSheepMap)[MirrorinUK]MIS-MendelianInheritanceinSheep

ChickGBASE-Chickengenomedb

第47页,课件共80页,创作于2023年2月VertebratesFugu-HGMPResourceCentreFuguProject(Fugurubripes)Medakafish-Mekadafish(Oryziaslatipes)serverArk-Tilapia-TilapiamossambicagenomedbThefishnet-ZebrafishserverFishBase-Globalinformationsystemonfishes第48页,课件共80页,创作于2023年2月MitochondrionandchloroplastGOBASE-OrganelleGenomeDatabaseMitoDat-MendelianInheritanceandtheMitochondriondb(mitochondrialnucleargenes)MITOMAP-HumanmitochondrialgenomedbMmtDB-MetazoamitochondrialDNAvariantsdbMitBASE-IntegratedmitochondrialDNAdbMitBASE-Pilot-DbofS.cerevisiaenucleargenesinvolvedinmitochondrialbiogenesisHvrBase-PrimatesmtDNAcontrolregionsequencescompilation第49页,课件共80页,创作于2023年2月MitochondrionandchloroplastMOUSE-MitochondrialandOtherUsefulSEquences(humanandapesmit.DNAdb)MITOP-Mitochondrialproteins,genesanddiseasesAMmtDB-MetazoanmitochondrialDNAsequences第50页,课件共80页,创作于2023年2月Insects

DrosophilaSWISS-PROTlist-LinkstoDrosophilaSWISS-PROTentriesFlyBase-Drosophilageneticandmoleculardb[MirroratEBI]FlyView-DrosophilaimagedbGIFTS-GeneInteractionsintheFlyTrans-WorldServerFlyNets-DbofmolecularinteractionsinDrosophilamelanogasterSOS-DGBD-DbofDrosophilaDNAsequencesannotatedwithregulatorybindingsitesMosquitoGenomics

第51页,课件共80页,创作于2023年2月InvertebratesWormBase-C.elegansdb[MirroratSanger]C.elegansWWWserver-atUniversityofTexasSouthwesternACeDb-CaenorhabditiselegansdbC.elegansMitochondrialDirectory-DataonC.elegansgenesformitochondrialproteinsC.elegansEST-C.elegansESTdbfromJapan(YujiKohara'sgroup)C.elegansSWISS-PROTlist-LinkstoC.elegansSWISS-PROTentriesWormPep-C.elegansproteinsdbWormPD-C.elegansproteindb

第52页,课件共80页,创作于2023年2月InvertebratesDictysteliumGenomeSequencingprojectatBCM

DictyosteliumdiscoideumgenomeprojectatIENA

DictyDb-DictyosteliumdiscoideumdbDicty_cDB-DictyosteliumdiscoideumcDNAproject

ConeshellsWebsite

Parasitegenomesdbandresources

ParasitegenomesWWWsite

PlasmoDB-P.falciparumgenomedb第53页,课件共80页,创作于2023年2月InvertebratesMalaria-WHO-Malariadb(fromWHO)P.falciparumSanger-P.falciparumgenomeprojectatSangerPFDB-PlasmodiumfalciparumGenomedbP.falciparum-PlasmodiumfalciparumGeneSequenceTagproject第54页,课件共80页,创作于2023年2月InvertebratesMAD-MalariaAntigendbMalariaparasitemetabolicpathways

LGN-LeishmaniaGenomeNetworkTrypanosomabruceigenomeproject

Trypanosomacruzigenomeproject

kDNA-KinetoplastMinicircleSequencedb第55页,课件共80页,创作于2023年2月PlantsNAL-AGIS-AccesstomanyplantgenomedatabasesattheNationalAgriculturalLibraryDemeter'sgenomes-AccesstomanyplantgenomedatabasesattheUSDA-ARSMendel-PlantgenenomenclaturedatabasefromCPGNAtDB-ArabidopsisthalianagenomedatabaseTAIR-TheArabidopsisInformationResourceMATDB-MIPSArabidopsisthalianadbTIGRAtGI-TIGRArabidopsisthalianaGeneIndexAGR-ArabidopsisGenomeResource

第56页,课件共80页,创作于2023年2月PlantsBeanGenes-BeansgenomedbBeanRef-BeansgenomedbandotherresourcesChlamyDB-ChlamydomonasreinhardtiigenomedbCropNet

-GenomemappingincropplantsCottonDB-CottongenomedbMaizeDb-MaizegenomedbINRAMaize-INRAMaizegenomedbZmDB-MaizegenomedatabasePisumsativum(pea)website第57页,课件共80页,创作于2023年2月Plants-Rice

RGP-RiceGenomeResearchProgramRiceGenes

R-MonsantoricegenomesiteTIGROsGI-TIGRRiceGeneIndexTIGRGmGI-TIGRSoybeanGeneIndexSnapdragon(A.majus)website

SorghumDB-SorghumgenomedbSoyBase-Soybeangenomedb第58页,课件共80页,创作于2023年2月PlantsSoyBasemetabolicdb-MetabolicsubsetofthesoybeangenomedbTIGRLeGI-TIGRTomatoGeneIndexDendrome-Foresttreesgenomedb第59页,课件共80页,创作于2023年2月FungiFGSC-FungalGeneticsStockCenterFGR-FungalGenomeResource

YeastSWISS-PROTlist-LinkstoS.cerevisiaeWWWsitesandtoSWISS-PROTentriesSGD-SaccharomycesgenomedbYPD-YeastproteindbMitBASE-Pilot-DbofS.cerevisiaenucleargenesinvolvedinmitochondrialbiogenesisYeastsnoRNA-YeastsmallnucleolarRNAsdbYTPdb-YeastTransportProteindbPathCalling-Yeastprotein-proteininteractiondb第60页,课件共80页,创作于2023年2月Fungi

Aspergilluswebsite

C.albicansSWISS-PROTlist-LinkstoC.albicansWWWsitesandtoSWISS-PROTentriesCandidaalbicans-CandidaalbicansserverattheUniv.ofMinnesotaNGP-NeurosporacrassagenomeprojectPC-PneumocystiscariniigenomeprojectS.pombeSWISS-PROTlist-LinkstoS.pombeWWWsitesandtoSWISS-PROTentriesS.pombeNIH-Fissionyeast(S.pombe)serverattheNIH第61页,课件共80页,创作于2023年2月Fungi

PhycomycesWebsite-ResourcesiteforscientistsworkingonPhycomyces

EMGlib-Completelysequencedbacterialgenomesandtheyeastgenome第62页,课件共80页,创作于2023年2月BacteriaICB-IdentificationandClassificationofBacteriaWDCM-WorldDataCenterforMicroorganismsListofBacterialNameswithStandinginNomenclature

MDB-TIGRMicrobialdb<A>-GenomeinformationbrokerforMicrobialgenomesHOBACGEN-HomologousBacterialGenesdbComparisonofthetransportcapabilitiesofbacterialgenomes-fromIanPaulsenBPGD-Bacterialpolysaccharidegenedb第63页,课件共80页,创作于2023年2月BacteriaBacterialquorumsensing

MicrobeWorld-Educationalsiteonmicrobes

E.coliSWISS-PROTlist-LinkstoE.coliWWWsitesandtoSWISS-PROTentriesEcoWeb/EcoGene-VerycomprehensiveE.colidbECCE-E.coliCellEnvelopeProteinDataCollectionECDC-E.colidbcollectionEcoCyc-EncyclopediaofE.coligenesandmetabolism第64页,课件共80页,创作于2023年2月Bacteria

GenProtEC-E.coligenomeandproteomedbColibri-E.coligenomedbfromPasteurInsituteECGC-E.coliGenomeCenteratWisconsinUniversityDDBJE.coli-E.colihomepageatDDBJ

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Micado-Microbialadvanceddb(B.subtilis+E.coli)(previouslyknownasMadBase)BSORF-JapaneseserveronB.subtilis

A.actinomycetemcomitans-ActinobacillusactinomycetemcomitansstrainHK1651genomeprojectB.stearothermophilus-Bacillusstearothermophilusstrain10genomeprojectB.pertussis-BordetellapertussisgenomeWWWsiteBbDB-TIGRBorreliaburgdorferigenomedb第66页,课件共80页,创作于2023年2月BacteriaiBGD-IntegratedBuchneragenomedbB.cepacia-BurkholderiacepaciagenomeprojectChlamydia-ChlamydiapneumoniaeandtrachomatisC.muridarum-TIGRChlamydiamuridarumstrainMoPngenomedbC.pneumoniaeAR39-TIGRChlamydiapneumoniaestrainAR39genomedbC.pneumoniaeJ138-JapaneseChlamydiapneumoniaestrainJ138genomedb第67页,课件共80页,创作于2023年2月BacteriaC.acetobutylicum-GTCClostridiumacetobutylicumstrainATCC824dataC.jejuni-CampylobacterjejunistrainNCTC11168genomeWWWsiteC.hutchinsonii-CytophagahutchinsoniigenomeprojectDrDB-TIGRDeinococcusradioduransstrainR1genomedbD.hafniense-DesulfitobacteriumhafniensegenomeprojectE.faecium-Enterococcusfaeciumgenomeproject第68页,课件共80页,创作于2023年2月BacteriaF.acidarmanus-FerroplasmaacidarmanusgenomeprojectF.tularensis-FrancisellatularensisgenomeWWWsiteH.influenzaeSWISS-PROTlist-LinkstoH.influenzaeWWWsitesandtoSWISS-PROTentriesHiDB-TIGRH.influenzaegenomedbHIDC-H.influenzaedbcollectionH.pyloriSWISS-PROTlist-LinkstoH.pyloriWWWsitesandtoSWISS-PROTentries第69页,课件共80页,创作于2023年2月BacteriaHpDB-TIGRHelicobacterpyloristrain26695genomedbH.pyloriJ99-AstraHelicobacterpyloristrainJ99genomedbPyloriGene-HelicobacterpylorigenmoicdbMC-1-MagnetococcusMC-1genomeprojectM.magnetotacticum-MagnetospirillummagnetotacticumgenomeprojectMycDB-MycobacteriumdbM.lepraeatGTC-GTCMycobacteriumlepraedataM.lepraeatSanger-SangerCentreM.lepraegenomeprojectTubercuList-MycobacteriumtuberculosisstrainH37RvgenomedbMtDB-TIGRMycobacteriumtuberculosisstrainOshkoshgenomedbM.tuberculosisatGTC-GTCMycobacteriumtuberculosisdata第70页,课件共80页,创作于2023年2月BacteriaM.tuberculosisatSanger-SangerCentreM.tuberculosisH37RvgenomeprojectM.tuberculosissecretedproteins

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N.meningitidisA-SangerCentreNeisseriameningitidisserogroupAstrainZ2491genomeprojectN.meningitidisB-TIGRNeisseriameningitidisserogroupBstrainMC58genomedbN.gonorrhoeae-NeisseriagonorrhoeaestrainFA1090genomeprojectN.europaea-NitrosomonaseuropaeagenomeprojectN.punctiforme-Nostocpunctiformegenomeproject第72页,课件共80页,创作于2023年2月BacteriaP.marinus-ProchlorococcusmarinusgenomeprojectP.aeruginosaproject-PseudomonasaeruginosagenomeprojectP.aeruginosadb-PseudomonasaeruginosagenomedbP.fluorescens-PseudomonasfluorescensgenomeprojectRhizobiumpNGR234aSWISS-PROTlist-L

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