OpenFOAM 安装记录.docx

OpenFOAM 安装记录最开始找到/download/4-1-source/ 按照官网的安装步骤进行，发现linux系统不对查看linux系统 # more /etc/issue显示 Fedora release 22 (Twenty Two) 安装步骤为 /download/4-1-linux/Unpacking the Sources1. 新建文件夹 /usr/local/OpenFOAM2. cd /usr/local/OpenFOAM3. su root4. 下载代码wget -O - /source/4-1 | tar xvzwget -O - /third-party/4-1 | tar xvz5. 解压mv ThirdParty-4.x-version-4.1 ThirdParty-4.1mv OpenFOAM-4.x-version-4.1 OpenFOAM-4.1Software for Compilation1. GCC 2. FLEX website /westes/flexi. 新建文件夹 /usr/local/FLEXii. cd /usr/local/FLEXiii. git clone /westes/flex.gitiv. ./autogen.sh A. 报错：Cant exec autopoint: No such file or directory at /usr/local/share/autoconf/Autom4te/FileUtils.pm line 344.autoreconf: failed to run autopoint: No such file or directoryautoreconf: autopoint is needed because this package uses Gettexta. 安装 help2man / Doneb. 安装 gettext / DoneProblem solvedB. 报错：stdin:1: error: Autoconf version 2.69 or higher is requireda. 安装 autoconf-2.69 / DoneProblem solvedv. ./configure A. 报错：configure.ac:31: option dist-lzip not recognizedautoreconf: automake failed with exit status: 1 a. 安装 lzip-1.18-2.fc26.x86_64.rpm / Done but uselessb. figuring out what is dist-lzip 暂时决定把这一行注释掉，啥后果之后再说c. configure.ac 中：AM_INIT_AUTOMAKE(-Wno-portability foreign check-news std-options dist-lzip parallel-tests subdir-objects 1.14.1)直接删除“dist-lzip”报错：configure.ac:31: require Automake 1.14.1, but have 1.11重新安装Automake 1.15B 报错：Cant locate Thread/Queue.pm in INC (you may need to install the Thread:Queue module) (INC contains: /usr/local/share/automake-1.15 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at /usr/local/bin/automake line 55.BEGIN failed-compilation aborted at /usr/local/bin/automake line 58.a. sudo yum install perl-Thread-QueueC. 报错：.inig.status: error: cannot find input file: Makefile a. 如果出现这种报错config.status: error: cannot find input file: src/Makefile.in，就在configure 之前执行如下命令aclocallibtoolize -forceautomake -add-missingautoconfautoheadermake clean/useless b. 不知道为什么把flex删了，重新下载之后 ./configure 时的报错都没有了，猜测应该是automake的版本太低，没有“dist-lzip”这个选项，所以重装automake1.5之后，问题消失vi. make A. 新的报错：You should only need it if you modified a .y file.You may want to install the GNU Bison package: /software/bison/安装 BisonB. 报错：Makefile:1420: recipe for target scan.c failedmake2: * scan.c Error 127locate scan.c发现包含于boost_1_63_0中，才发现虽然之前下载了，但还没有安装把相关的.c 和 .h 文件拷到 /usr/include 中。C. 报错：gcc -DHAVE_CONFIG_H -I. -DLOCALEDIR=/usr/local/share/locale -g -O2 -MT stage1flex-scan.o -MD -MP -MF .deps/stage1flex-scan.Tpo -c -o stage1flex-scan.o test -f scan.c | echo ./scan.cIn file included from scan.c:13:0:/usr/include/scan.h:40:5: error: unknown type name PARSEPARSE * parse;后面还有相似的报错，推测应该是boost库没有配置好,so what should i do？所谓的未知名PARSE应该是来源于scan.h中所引用的 parse.h ，而其居然不是来源于boost而是flex, 但scan.h这个文件是从boost中拷过来的而parse.h 中没有关于PARSE的定义，所以为什么安装软件时会有这种错误？又不是调试程序，我怎么知道PARSE是干什么的，怎么解决啊，又不能自己编一个即使注释掉PARSE的部分（但人家这么编的一定是有原因的啊），又会有一大堆的错误为什么呀，一个我不知道是干什么的程序，我怎么会调试？！考虑到除了parse.h 和 parse.c 是flex自带的，其他的都是从boost库中拷过来的，然而在flex 的readme 文件中并没有提到boost 库，所以这一步到底有多大的正确性？a. 不知道怎么解决，把readme 再检查一遍，把能装的都装上安装 GNU texinfo /DONE安装 GNU indent /期间也有报错，但解决得挺容易，就不赘述了b. 在flex的readme 文件中：* GNU bison; to generate parse.c from parse.ySo where dose parse.h come from ?vii. make install也不知道为什么，找来的外援不小心把/usr/local里的文件都给删了，我又把要用的东西给重装了一遍，还好之前都是用windows下载的安装包，也记录了报错的解决办法，用了一上午的时间把能装的都装上了，而且莫名其妙地之前的关于“scan.h”的问题也没有了3. cmake /前段时间才装的，应该是可以用的4. QT 4.8.x / 才把原来装的Qt-5.8删了，重装了Qt-4.8.6,应该是没问题了5. Git / Done6. OpenMPI / 已安装 intelMPI 不知道可不可以，但也可以不用mpiCompiling OpenFOAM1. # cd /usr/local/OpenFOAM/ThirdParty-4.1# ./Allwmake# ./makeParaViewA. 报错：CMake Error at /usr/local/OpenFOAM/ThirdParty-4.1/ParaView-5.0.1/CMake/generate_proxydocumentation.cmake:22(message):No xmlpatterns executable was defined!a. 找到一个解决方案,不知道能不能work ,等待时间略长，因为要在编译时加上-xmlpatterns: /Forums/openfoam-installation/162189-openfoam-3-0-0-installation-source-code.html 大概是解决了吧，因为出现了新的问题B. 报错：Building up file structure.QSqlDatabase: QSQLITE driver not loadedQSqlDatabase: available drivers: Cannot open data base file /usr/local/OpenFOAM/ThirdParty-4.1/build/linux64Gcc/ParaView-5.0.1/Applications/ParaView/Documentation/paraview.qch!a. 安装MySQL 安装过程：/bookwed/p/5896619.htmlb. 添加路径 /ljasdf123/article/details/7426291vim /etc/profile在最后添加 export QT_PLUGIN_PATH=/usr/local/Trolltech/Qt-4.8.6/plugins/Problem solved2. # cd /usr/local/OpenFOAM/OpenFOAM-4.1# ./AllwmakeA. 报错：Boost does not appear to be installedstopping builda 安装boost 安装过程：/henuyx/article/details/46661933b 安装Qt 安装过程： /chen_swe/article/details/50636857 ./configure - qmake - qmake install 源码：C:UsersUSERPicturesSoftware for LInuxc. 安装 cmake 安装过程：/install/ ./bootstrap - make - make installd. 安装CGAL e. 安装 METIS 不知道为什么，好像OpenFOAM 不能识别，不过不是强制性要求i. # cmake .报错：Cannot find source file:GKlib/conf/check_thread_storage.cTried extensions .c .C .c+ .cc .cpp .cxx .m .M .mm .h .hh .h+ .hm .hpp .hxx .in .txx解决：cmake -DCMAKE_CONFIGURATION-TYPES=Release -DGKLIB_PATH=/usr/local/metis-5.1.0/GKlib .ii. # makeiii. # make install报错：CMake Error at include/cmake_install.cmake:36 (file):file INSTALL destination: /include is not a directory.Call Stack (most recent call first): cmake_install.cmake:37 (include)f. 在文件 makeCGAL中改为 BOOST_SOURCE_DIR=/usr/local/boost_1_63_0，/Problem solvedB. 报错：cc1plus: warning: /include: not a directoryscotchDecomp.C:36:20: fatal error: scotch.h: No such file or directorya. 安装 scotch 以为在ThirdParty-4.1里的./Allwmake会安装所有需要的软件呢，看来我高估它了报错：././lib/libscotch.a(parser_ll.o): In function scotchyylex:parser_ll.c:(.text+0xf0f): undefined reference to scotchyywrap在一个网页/show_bug.cgi?id=598258 中写道:说是因为Flex的版本升级后，与之前的版本在某方面不一样了，因此需要打一个补丁。补丁：https:/gforge.inria.fr/tracker/index.php?func=detail&aid=21095&group_id=248&atid=1081找到这个补丁后，发现是对scotch-6.0.4的补丁，而OpenFOAM所包含的scotch为scotch-6.0.3, 尝试修改补丁文件中的相关部分，然而任然会报错，所以重新下载scotch-6.0.4，对其进行补丁修改，之后编译通过，完成是scotch-6.0.4的安装，但是不知道对OpenFOAM的编译有没有影响。关于patch 文件，可见/huguangshanse00/article/details/35780081具体步骤：i. 将补丁放入文件夹 /usr/local/OpenFOAM/ThirdParty-4.1/scotch_6.0.4ii. # cd /usr/local/OpenFOAM/ThirdParty-4.1/scotch_6.0.4/srciii. # patch -p1 ./scotch-6.0.4-flex-2.6.3-fix.patchiv. 提示 cant find file to patch at input line 3 File to patch:键入 /usr/local/OpenFOAM/ThirdParty-4.1/scotch_6.0.4/src/libscotch/parser_ll.l v. # makevi. # make install/Problem solvedC. 报错：/usr/local/OpenFOAM/OpenFOAM